Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 MIR4742-201ENST00000581069 85 ntBASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 uc_338.5-201ENST00000611839 155 ntBASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 AL391261.4-201ENST00000616012 481 ntBASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 FP236240.3-201ENST00000623061 327 ntBASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KHDC1Q4VXA5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 RNU6-715P-201ENST00000365204 103 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.356-201ENST00000365475 113 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 RNU6-831P-201ENST00000384548 107 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 Y_RNA.529-201ENST00000384586 119 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AL139039.1-201ENST00000401900 692 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AL353678.1-201ENST00000422735 741 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 MTND4P28-201ENST00000426217 387 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 TAAR7P-201ENST00000436141 242 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 PRPS1P1-201ENST00000445305 876 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 VN1R17P-201ENST00000472048 1090 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC012181.1-201ENST00000479895 423 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 RPS15AP34-201ENST00000487776 387 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC083904.1-201ENST00000487828 231 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 RNA5SP468-201ENST00000516782 93 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 MTCO3P23-201ENST00000561363 289 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 BNIP3P25-201ENST00000596023 559 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC092747.3-201ENST00000603769 301 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC098826.3-201ENST00000603823 466 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 Z82243.1-201ENST00000609432 473 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 U2.17-201ENST00000611454 95 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC103705.1-201ENST00000619013 241 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AC005858.4-201ENST00000623191 700 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 AP003400.5-201ENST00000624827 617 ntBASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
KHDC1Q4VXA5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 PNPT1P2-201ENST00000456768 2050 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RNU6-50P-201ENST00000362356 103 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RNU6-371P-201ENST00000364283 108 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 SNORA16.2-201ENST00000390991 127 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AL122016.1-201ENST00000403365 367 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 BX682237.1-201ENST00000415016 335 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 BTF3L4P3-201ENST00000418879 476 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 NCOR1P3-201ENST00000420479 303 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 HSPE1P1-201ENST00000421494 318 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AL669831.1-202ENST00000428504 417 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 GTF2IP13-201ENST00000438487 386 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 UBE2V1P7-201ENST00000446395 340 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC092001.1-201ENST00000453012 261 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AMD1P1-201ENST00000457220 922 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AL160314.1-201ENST00000490836 438 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RNU6-189P-201ENST00000516120 101 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 SCARNA14-201ENST00000516903 136 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RNU6-143P-201ENST00000516942 93 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RNA5SP471-201ENST00000516971 106 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC244505.7-201ENST00000599675 272 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC106900.2-201ENST00000604994 317 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC087045.1-201ENST00000605856 382 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AL022345.1-201ENST00000607292 135 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 AC004825.2-201ENST00000616634 455 ntBASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
KHDC1Q4VXA5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms