Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 OR4R1P-201ENST00000529879 463 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 HMGB1P6-201ENST00000569046 646 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 MIR3944-201ENST00000581277 108 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 MIR3609-201ENST00000582661 80 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AC004696.1-201ENST00000614345 607 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 SNHG22-203ENST00000617833 660 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 FER-210ENST00000628534 558 ntTSL 5 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AP000553.6-201ENST00000641242 118 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 CASC19-280ENST00000642102 1351 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 SNORA72.1-201ENST00000363485 129 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RNU6-511P-201ENST00000363496 107 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RNU6-1027P-201ENST00000383998 107 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RNU6-876P-201ENST00000391295 104 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 ZNF90P2-204ENST00000419323 1075 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 GTF2IP20-201ENST00000431663 360 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AC005094.1-201ENST00000440420 368 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 PIGFP3-201ENST00000441918 722 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 CBWD4P-201ENST00000445695 655 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AL671855.1-201ENST00000446875 1203 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 PCBP2P3-201ENST00000509726 843 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AP006245.1-201ENST00000522549 120 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RPL21P12-201ENST00000559810 515 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 MIR5187-201ENST00000583479 76 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 MIR3662-201ENST00000637030 95 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
LONRF3Q496Y0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.09□□□□□ -1.75
LONRF3Q496Y0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LONRF3Q496Y0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 CD24P4-201ENST00000382840 243 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 MT-TL1-201ENST00000386347 75 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 RNA5SP252-201ENST00000391131 119 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC006989.1-201ENST00000427212 131 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 RPS20P5-201ENST00000434808 360 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC016696.1-201ENST00000446949 318 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 MTND3P10-201ENST00000450967 341 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 RNU6-835P-201ENST00000516974 104 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC060780.3-201ENST00000589464 80 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 SRGNP1-201ENST00000603392 451 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 HSPE1P7-201ENST00000604681 321 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC019176.2-201ENST00000611579 315 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 YWHAEP7-203ENST00000622054 312 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC110801.1-201ENST00000623590 212 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 MAPK10-322ENST00000641485 4530 ntBASIC4.08□□□□□ -1.76
LONRF3Q496Y0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LONRF3Q496Y0 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
LONRF3Q496Y0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LONRF3Q496Y0 MTCO1P12-201ENST00000414273 1543 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms