Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 Y_RNA.3-201ENST00000362331 103 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SNORA80A-201ENST00000363922 136 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SNORA71.1-201ENST00000364523 117 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 RNU6-7-201ENST00000364784 107 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 RN7SKP226-201ENST00000364912 300 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 RNU6-8-201ENST00000365467 107 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 RNU6-701P-201ENST00000384059 107 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 MIR591-201ENST00000385290 95 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 GSTA9P-201ENST00000406231 611 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 MIR1290-201ENST00000408735 78 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC093106.2-201ENST00000428212 385 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AL451074.3-201ENST00000437709 472 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 MTATP6P30-201ENST00000443540 664 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SNORD97-201ENST00000459187 142 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC096576.1-201ENST00000489014 359 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC107401.1-201ENST00000503426 685 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 RPL37P25-201ENST00000507308 276 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC091133.4-201ENST00000511142 308 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC010493.1-201ENST00000513479 292 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SCARNA24.1-201ENST00000516465 137 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 GLUD1P4-201ENST00000590914 418 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC136475.10-201ENST00000620253 385 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 AL589994.2-201ENST00000621124 579 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SNORA50A-202ENST00000629536 136 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 OR5AK4P-201ENST00000635912 903 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 SDAD1P2-201ENST00000441308 2028 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP41Q3LFD5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
USP41Q3LFD5 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
USP41Q3LFD5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP41Q3LFD5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP41Q3LFD5 CR848007.1-201ENST00000442354 1699 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 HSPE1P11-201ENST00000339579 310 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RNU6-181P-201ENST00000363225 107 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RNU6-456P-201ENST00000384493 107 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 NDUFS5P1-201ENST00000405668 289 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 U3.42-201ENST00000408746 214 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RN7SKP220-201ENST00000410611 288 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RAC1P6-201ENST00000423911 575 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AL356867.1-201ENST00000429623 299 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RPL23AP30-201ENST00000432419 501 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 MTCYBP1-201ENST00000454315 1119 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 RNU6-445P-201ENST00000516949 107 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 AP005205.1-201ENST00000563503 508 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.34□□□□□ -1.87
USP41Q3LFD5 AL390240.1-201ENST00000612950 384 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AL359740.1-201ENST00000624340 592 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 AC073476.4-201ENST00000628409 72 ntBASIC3.34□□□□□ -1.87
USP41Q3LFD5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP41Q3LFD5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.88
USP41Q3LFD5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP41Q3LFD5 AC008568.2-201ENST00000623862 2313 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP41Q3LFD5 RNU6-188P-201ENST00000364207 107 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 RNU5E-6P-201ENST00000365574 115 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 AL591034.1-201ENST00000407447 340 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 OR2AS1P-201ENST00000427827 319 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 MTCO2P11-201ENST00000431069 680 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 MTND1P34-201ENST00000438556 671 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 RN7SL432P-201ENST00000484057 298 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 AC023194.1-201ENST00000493084 308 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 SCARNA15.2-201ENST00000516409 127 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 NRON-201ENST00000517270 370 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
USP41Q3LFD5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.33□□□□□ -1.88
USP41Q3LFD5 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms