Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 AC016745.2-201ENST00000608834 3443 ntBASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RSPO4Q2I0M5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC020633.1-201ENST00000468439 2247 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ZNF826P-207ENST00000622273 1910 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 SPRR2C-201ENST00000290702 219 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 RPL9P7-201ENST00000330965 580 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 Y_RNA.23-201ENST00000362496 106 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MIR483-201ENST00000385070 76 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MIR589-201ENST00000385238 99 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 SNORA12.2-201ENST00000391040 156 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL358453.1-201ENST00000422522 250 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL512844.2-201ENST00000433990 593 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 SEPT7P4-201ENST00000437076 306 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC004938.1-201ENST00000438468 308 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL513043.1-201ENST00000439124 535 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 RPL23AP33-201ENST00000442301 452 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 PRSS3P4-201ENST00000453323 162 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 U8.22-201ENST00000459141 133 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC008481.1-201ENST00000463278 396 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MTND3P25-201ENST00000509243 135 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 RNU6-677P-201ENST00000516914 101 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 MIR5692C2-201ENST00000577959 77 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 PRPF19P1-201ENST00000584766 898 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC022726.1-201ENST00000587475 207 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC067852.4-201ENST00000590314 478 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AC008739.3-201ENST00000603262 127 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 AL139124.1-201ENST00000609123 421 ntBASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RSPO4Q2I0M5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AP001029.2-203ENST00000589795 4910 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RNU6-637P-201ENST00000384050 107 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 Y_RNA.563-201ENST00000384707 108 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RNU11-201ENST00000387069 134 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RNU4-30P-201ENST00000410245 143 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RNU6-1064P-201ENST00000410626 104 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AC022022.1-201ENST00000430304 178 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RPS29P17-201ENST00000430795 166 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AC005002.2-201ENST00000438228 269 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RPL26P6-201ENST00000440913 438 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AL357134.1-201ENST00000445848 426 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 UQCRBP2-201ENST00000447827 297 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AP004242.1-201ENST00000533701 349 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 MIR4504-201ENST00000577413 92 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AL360012.1-201ENST00000602813 131 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AC009318.2-201ENST00000610917 651 ntBASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RSPO4Q2I0M5 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms