Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-462P-201ENST00000362659 105 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-433P-201ENST00000363216 104 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 SNORD113-6-201ENST00000363345 75 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-931P-201ENST00000363850 107 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-1078P-201ENST00000364522 103 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNA5SP138-201ENST00000365098 114 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RNA5SP354-201ENST00000391247 136 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 SNORA3.2-201ENST00000408221 125 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 MIR320C1-201ENST00000408566 88 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RPL22P18-201ENST00000417197 377 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC083875.1-201ENST00000419509 405 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 HMGN2P38-201ENST00000423806 265 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC009414.1-201ENST00000427200 443 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 IFNA11P-201ENST00000446352 526 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AP000542.1-201ENST00000448473 371 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 PAXBP1P1-201ENST00000449315 447 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AL135752.1-201ENST00000479477 471 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC034244.1-201ENST00000507687 207 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 CASP1P1-201ENST00000526345 212 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC025281.1-201ENST00000567026 265 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 RPL23AP84-201ENST00000571193 464 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 MIR4760-201ENST00000585040 80 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AL391001.1-201ENST00000602747 715 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AL121917.1-203ENST00000605534 577 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC013244.3-201ENST00000605614 388 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 UCA1.1-201ENST00000620952 75 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC079597.1-201ENST00000624306 508 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 ZNF658B-202ENST00000615961 3375 ntBASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC173Q0VFZ6 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC009902.3-201ENST00000606235 2172 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 RNU4-28P-201ENST00000364739 141 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-198P-201ENST00000384258 104 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 RPS24P7-201ENST00000416921 246 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL445669.1-201ENST00000426743 755 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 SRIP2-201ENST00000428470 166 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 RPL23AP35-201ENST00000451906 501 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC233279.1-201ENST00000455300 423 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL049714.1-201ENST00000466686 347 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL359273.1-201ENST00000510918 627 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 RN7SKP265-201ENST00000516448 223 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC023050.2-201ENST00000544968 387 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC027176.1-201ENST00000560204 514 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 MIR3921-201ENST00000577308 85 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 MIR3117-201ENST00000584034 78 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 UBE2L4-201ENST00000587688 464 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL031281.1-201ENST00000604049 488 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC025588.2-201ENST00000604851 466 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 HMGB1P24-202ENST00000615653 685 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AC009159.1-201ENST00000618386 642 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL603758.1-201ENST00000618654 241 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL607023.1-201ENST00000620045 248 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 AL158801.5-201ENST00000623123 465 ntBASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC173Q0VFZ6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 HSPE1P11-201ENST00000339579 310 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 RNU5A-1-201ENST00000362698 116 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-853P-201ENST00000364306 107 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 RNU6-723P-201ENST00000383973 107 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 SNORA36C-201ENST00000384289 132 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
CCDC173Q0VFZ6 AL591416.1-201ENST00000404015 867 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms