Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC006254.3-201ENST00000603353 884 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AL162713.1-201ENST00000604480 262 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.77□□□□□ -1.97
LMO4P61968 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 AL132765.2-201ENST00000610812 351 ntBASIC2.77□□□□□ -1.97
LMO4P61968 DISC2.1-201ENST00000612827 205 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC126177.8-201ENST00000618339 1015 ntBASIC2.77□□□□□ -1.97
LMO4P61968 AC005858.4-201ENST00000623191 700 ntBASIC2.77□□□□□ -1.97
LMO4P61968 FRG1KP-201ENST00000623592 341 ntBASIC2.77□□□□□ -1.97
LMO4P61968 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.77□□□□□ -1.97
LMO4P61968 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LMO4P61968 AC007256.1-201ENST00000392253 2765 ntBASIC2.77□□□□□ -1.97
LMO4P61968 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 AP001486.2-201ENST00000561652 5113 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LMO4P61968 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LMO4P61968 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LMO4P61968 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LMO4P61968 RNU4-79P-201ENST00000362764 141 ntBASIC2.76□□□□□ -1.97
LMO4P61968 Y_RNA.166-201ENST00000363730 102 ntBASIC2.76□□□□□ -1.97
LMO4P61968 Y_RNA.548-201ENST00000384656 105 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MIR1-2-201ENST00000384961 85 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 NDUFB4P4-201ENST00000404822 243 ntBASIC2.76□□□□□ -1.97
LMO4P61968 FAT1P1-201ENST00000406588 507 ntBASIC2.76□□□□□ -1.97
LMO4P61968 RNU4-47P-201ENST00000410876 114 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.76□□□□□ -1.97
LMO4P61968 BEND7P1-201ENST00000422058 457 ntBASIC2.76□□□□□ -1.97
LMO4P61968 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 MTCO2P29-201ENST00000465212 189 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 RPS23P3-201ENST00000470993 430 ntBASIC2.76□□□□□ -1.97
LMO4P61968 HMGN1P10-201ENST00000474557 553 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 SNORA31.8-201ENST00000516327 108 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 IGKV2D-23-201ENST00000518179 286 ntBASIC2.76□□□□□ -1.97
LMO4P61968 NARSP2-201ENST00000518524 679 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 HPRT1P3-201ENST00000539521 576 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 AC078814.3-201ENST00000553036 491 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC005476.1-201ENST00000554427 397 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.76□□□□□ -1.97
LMO4P61968 AL121576.1-201ENST00000556055 276 ntBASIC2.76□□□□□ -1.97
LMO4P61968 RPL21P12-201ENST00000559810 515 ntBASIC2.76□□□□□ -1.97
LMO4P61968 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.76□□□□□ -1.97
LMO4P61968 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.76□□□□□ -1.97
LMO4P61968 HMGB1P6-201ENST00000569046 646 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 MIR4644-201ENST00000579929 84 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MIR3146-201ENST00000580367 79 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC013553.2-201ENST00000604244 589 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AL022099.1-201ENST00000604551 712 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC073657.2-201ENST00000605661 303 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AL050343.2-201ENST00000607338 280 ntBASIC2.76□□□□□ -1.97
LMO4P61968 AC112204.3-201ENST00000623822 332 ntBASIC2.76□□□□□ -1.97
LMO4P61968 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 AC100810.6-201ENST00000638068 285 ntBASIC2.76□□□□□ -1.97
LMO4P61968 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 AL513302.2-201ENST00000562313 1842 ntBASIC2.76□□□□□ -1.97
LMO4P61968 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.76□□□□□ -1.97
LMO4P61968 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
LMO4P61968 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMO4P61968 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.75□□□□□ -1.97
LMO4P61968 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.75□□□□□ -1.97
LMO4P61968 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 RIOK3P1-201ENST00000418778 1528 ntBASIC2.75□□□□□ -1.97
LMO4P61968 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMO4P61968 RPL7P26-201ENST00000333817 754 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNU6-223P-201ENST00000362830 107 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNU6-1097P-201ENST00000363586 107 ntBASIC2.75□□□□□ -1.97
LMO4P61968 RNY1P12-201ENST00000364251 105 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms