Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RN7SKP289-201ENST00000517244 295 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.21□□□□□ -1.9
SEC61A1P61619 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.21□□□□□ -1.9
SEC61A1P61619 HPRT1P3-201ENST00000539521 576 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.21□□□□□ -1.9
SEC61A1P61619 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 ANP32BP3-201ENST00000559213 706 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC037471.2-201ENST00000564941 598 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.21□□□□□ -1.9
SEC61A1P61619 MIR4703-201ENST00000577728 79 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.21□□□□□ -1.9
SEC61A1P61619 AC243960.4-201ENST00000600532 288 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.21□□□□□ -1.9
SEC61A1P61619 AC013553.2-201ENST00000604244 589 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AL132765.2-201ENST00000610812 351 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.21□□□□□ -1.9
SEC61A1P61619 AC009233.1-201ENST00000616477 371 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC007742.2-201ENST00000618226 398 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 MIR6130-201ENST00000619419 109 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 RMST_7.1-201ENST00000621935 268 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 CR392039.5-201ENST00000623201 510 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.21□□□□□ -1.9
SEC61A1P61619 AC112200.1-201ENST00000625015 234 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 GABPAP-201ENST00000419271 1356 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A1P61619 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A1P61619 DDX10P1-201ENST00000448545 1933 ntBASIC3.21□□□□□ -1.9
SEC61A1P61619 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEC61A1P61619 USP8P1-201ENST00000494673 3183 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.2□□□□□ -1.9
SEC61A1P61619 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 MTND5P17-201ENST00000418405 1603 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 SNORD115-7-201ENST00000365306 82 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RNU6-61P-201ENST00000365528 109 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RNU6-1181P-201ENST00000384191 106 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 Y_RNA.576-201ENST00000384781 102 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 MIR607-201ENST00000385241 96 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SEC61A1P61619 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RNU6-193P-201ENST00000410977 107 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AL139247.1-201ENST00000422768 325 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC018644.1-201ENST00000429934 551 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AL365400.1-201ENST00000431854 640 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 ERLEC1P1-201ENST00000433806 578 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.2□□□□□ -1.9
SEC61A1P61619 CYCSP43-201ENST00000438233 310 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 NOTCH2P1-201ENST00000443481 624 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.2□□□□□ -1.9
SEC61A1P61619 SNORD97-201ENST00000459187 142 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 RBBP4P6-201ENST00000508098 202 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC104806.1-201ENST00000508720 308 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AC108078.2-201ENST00000510750 236 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 TRMT10BP1-201ENST00000519377 943 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC105029.1-201ENST00000520250 669 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC007991.1-201ENST00000522680 631 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 OR5D17P-201ENST00000531492 978 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AL118558.2-201ENST00000556294 238 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.2□□□□□ -1.9
SEC61A1P61619 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.2□□□□□ -1.9
SEC61A1P61619 KLKP1-201ENST00000595979 403 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 MIR92B-201ENST00000607575 96 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 SNHG22-203ENST00000617833 660 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.2□□□□□ -1.9
SEC61A1P61619 AC012442.3-202ENST00000636742 206 ntBASIC3.2□□□□□ -1.9
SEC61A1P61619 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
SEC61A1P61619 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.2□□□□□ -1.9
SEC61A1P61619 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEC61A1P61619 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
SEC61A1P61619 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A1P61619 AC073073.2-201ENST00000609827 2578 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SEC61A1P61619 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEC61A1P61619 Y_RNA.184-201ENST00000363884 108 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 SNORA23-201ENST00000365128 182 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 SMIM11P1-201ENST00000369586 178 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 RNU6-1011P-201ENST00000384668 107 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 MIR514A2-201ENST00000385131 88 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 MIR514A3-201ENST00000385132 88 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 SOD2P1-201ENST00000396543 562 ntBASIC3.19□□□□□ -1.9
SEC61A1P61619 AL359634.1-202ENST00000404721 284 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms