Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AP001350.1-201ENST00000601906 1524 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNU6-1252P-201ENST00000363054 104 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNU6-82P-201ENST00000363970 107 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNA5SP509-201ENST00000364577 119 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 Y_RNA.315-201ENST00000365117 102 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 SNORA75.4-201ENST00000391278 119 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AL391417.1-201ENST00000404100 426 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 HSPE1P26-201ENST00000405341 275 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR1250-201ENST00000408098 113 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR548K-201ENST00000408406 116 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR548F5-201ENST00000408421 86 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNU4-46P-201ENST00000410818 138 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 VN1R36P-201ENST00000414936 291 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RAC1P6-201ENST00000423911 575 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AL157831.1-201ENST00000426134 473 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RPL21P112-201ENST00000434403 463 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 GTF2IP13-201ENST00000438487 386 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RPL23AP52-201ENST00000439311 478 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 BRK1P2-201ENST00000442875 223 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RN7SL432P-201ENST00000484057 298 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RN7SL810P-201ENST00000493031 276 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNU6-273P-201ENST00000516937 96 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 RNU6-685P-201ENST00000517088 95 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC090136.1-201ENST00000520009 240 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 HMGN1P28-201ENST00000521340 364 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AP000889.2-201ENST00000532684 490 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 OR11H5P-201ENST00000554039 926 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR3171-201ENST00000584270 74 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 BNIP3P22-201ENST00000593399 556 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 IPO5P1-202ENST00000600039 287 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 DPPA3P3-201ENST00000603842 430 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC245389.1-201ENST00000605141 529 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AL162730.1-201ENST00000605734 292 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AL133215.3-201ENST00000609801 448 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR6716-201ENST00000613413 80 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC083809.1-201ENST00000615051 472 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AL450472.3-201ENST00000615578 367 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MIR6130-201ENST00000619419 109 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC090971.5-201ENST00000621102 293 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC134503.1-201ENST00000633048 54 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC007496.3-201ENST00000624987 3443 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MTCO1P24-201ENST00000515438 1558 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
ERVFC1-1P60608 AC116667.1-201ENST00000604855 2072 ntBASIC3.04□□□□□ -1.92
ERVFC1-1P60608 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
ERVFC1-1P60608 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
ERVFC1-1P60608 OR5P1P-201ENST00000299512 925 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 MIR369-201ENST00000362155 70 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 SNORA31-201ENST00000362607 130 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 Y_RNA.216-201ENST00000364205 93 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RNU6-701P-201ENST00000384059 107 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RNU6-1297P-201ENST00000384415 104 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RNU6-1127P-201ENST00000384580 107 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 MIR548P-201ENST00000408336 84 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RNA5SP36-201ENST00000410197 133 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RNU6-712P-201ENST00000410558 100 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 POLHP1-201ENST00000411806 470 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 AC011933.1-201ENST00000413334 321 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 SSXP9-201ENST00000417503 292 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RPL17P36-201ENST00000420302 549 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 AL356387.2-201ENST00000422272 243 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RPL7AP25-201ENST00000423357 805 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.03□□□□□ -1.92
ERVFC1-1P60608 HMGB1P37-201ENST00000439613 609 ntBASIC3.03□□□□□ -1.92
ERVFC1-1P60608 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ERVFC1-1P60608 RPS15AP27-201ENST00000449183 343 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms