Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RMST_9.1-201ENST00000619945 193 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.74□□□□□ -1.81
CLRN1P58418 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN1P58418 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.74□□□□□ -1.81
CLRN1P58418 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.74□□□□□ -1.81
CLRN1P58418 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLRN1P58418 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 RNU6-1179P-201ENST00000384667 107 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 RNU6-1050P-201ENST00000410388 107 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 RNU6-607P-201ENST00000411283 108 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 HMGB1P9-201ENST00000429856 646 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 ATP5HP2-201ENST00000433885 485 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 AL137792.2-201ENST00000443484 235 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 RANP8-201ENST00000444720 713 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 RNU7-138P-201ENST00000459479 64 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 RN7SL303P-201ENST00000469773 251 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AP000926.1-201ENST00000479573 241 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC006517.1-201ENST00000480485 328 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC022493.1-201ENST00000492984 337 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC008958.1-201ENST00000511047 682 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC026782.1-201ENST00000512952 449 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 SMURF2P1-201ENST00000514992 481 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 Y_RNA.670-201ENST00000516255 105 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 SNORA31.8-201ENST00000516327 108 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 Vault.1-201ENST00000516474 102 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC022634.1-201ENST00000520765 532 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC087369.1-201ENST00000520775 996 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC009643.1-201ENST00000532030 391 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 TRAV8-5-201ENST00000537369 341 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN1P58418 MIR1273C-201ENST00000578669 77 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 LRRC37A5P-203ENST00000580181 585 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC005255.1-201ENST00000593748 216 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 IPO5P1-202ENST00000600039 287 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN1P58418 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 RNU6-85P-201ENST00000605989 107 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 AC009229.3-201ENST00000608056 282 ntBASIC3.73□□□□□ -1.81
CLRN1P58418 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
CLRN1P58418 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN1P58418 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CLRN1P58418 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLRN1P58418 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN1P58418 SNORD62.1-201ENST00000362541 86 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 SNORD3E-201ENST00000362899 217 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 SNORA75B-201ENST00000384053 137 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RNU6-306P-201ENST00000384617 107 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 MIR301A-201ENST00000385261 86 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLRN1P58418 RNU6-328P-201ENST00000390887 106 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 U3.22-201ENST00000391120 215 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 Y_RNA.594-201ENST00000410373 140 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 CYCSP33-201ENST00000414485 327 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 Z85995.1-201ENST00000415547 335 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RPL27AP8-201ENST00000424277 446 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AL732292.1-201ENST00000426692 226 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RPS6P12-201ENST00000432491 726 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN1P58418 HMGB3P30-201ENST00000457863 606 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RPL7AP28-201ENST00000464513 571 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RPS20P22-201ENST00000473700 357 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RPL7P42-201ENST00000481005 679 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC097473.1-201ENST00000508142 408 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC008716.1-201ENST00000511084 513 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.72□□□□□ -1.81
CLRN1P58418 Y_RNA.708-201ENST00000516950 96 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 RNU6-1073P-201ENST00000517182 106 ntBASIC3.72□□□□□ -1.81
CLRN1P58418 AC069113.1-201ENST00000517763 267 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms