Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC025678.1-201ENST00000567861 338 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN2P57739 AP001094.1-201ENST00000579805 193 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN2P57739 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN2P57739 AC012531.5-201ENST00000611375 151 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AC025034.2-201ENST00000623264 286 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 AL160394.1-201ENST00000624765 724 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 MTND5P42-201ENST00000637720 498 ntBASIC3.3□□□□□ -1.88
CLDN2P57739 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN2P57739 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN2P57739 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CLDN2P57739 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN2P57739 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 Y_RNA.402-201ENST00000383972 102 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 RNU6-190P-201ENST00000384154 102 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AL136116.1-201ENST00000403591 381 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 NDUFB4P4-201ENST00000404822 243 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AL591034.1-201ENST00000407447 340 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AC114491.1-201ENST00000416095 246 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AL109913.1-201ENST00000421173 514 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 UBE2D3P2-201ENST00000424409 445 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN2P57739 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN2P57739 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN2P57739 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 HMGN2P7-201ENST00000456186 273 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN2P57739 OR5B19P-201ENST00000531766 928 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
CLDN2P57739 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN2P57739 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN2P57739 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AC007621.1-201ENST00000604544 437 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 AC107294.1-201ENST00000609524 467 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN2P57739 AP001486.2-201ENST00000561652 5113 ntBASIC3.29□□□□□ -1.88
CLDN2P57739 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN2P57739 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN2P57739 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN2P57739 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLDN2P57739 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
CLDN2P57739 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLDN2P57739 ZNF807-201ENST00000328088 1707 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN2P57739 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLDN2P57739 RNY4P14-201ENST00000363656 96 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SNORA62.1-201ENST00000364287 154 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 RNU4-12P-201ENST00000365233 139 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 RNU6-61P-201ENST00000365528 109 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 Y_RNA.450-201ENST00000384198 113 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SNORA48.5-201ENST00000391143 135 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 RNU2-33P-201ENST00000410344 192 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC009237.5-201ENST00000414271 501 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 CALM2P2-201ENST00000428512 440 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 RPL7P54-201ENST00000438336 674 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 BNIP3P2-201ENST00000441221 577 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 FDX1P2-201ENST00000450769 375 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 RNU6-261P-201ENST00000459506 102 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SNRPGP3-201ENST00000469405 227 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AL160314.1-201ENST00000490836 438 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SNORA40.12-201ENST00000516329 111 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN2P57739 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN2P57739 OR5AL2P-201ENST00000532185 920 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN2P57739 TRAV28-201ENST00000557548 323 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AC106782.4-201ENST00000568264 210 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN2P57739 MTND1P37-201ENST00000636562 264 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 MIR1321-201ENST00000637766 79 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
CLDN2P57739 AC007785.2-201ENST00000598627 1916 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
CLDN2P57739 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 AC103710.2-202ENST00000641454 2853 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN2P57739 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
CLDN2P57739 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CLDN2P57739 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms