Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 GLYCAM1-201ENST00000546596 285 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX1P55347 AC093012.1-202ENST00000549403 582 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 PRELID2P1-201ENST00000552837 301 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PKNOX1P55347 AL359212.1-201ENST00000556608 614 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 MYL12BP1-201ENST00000569826 507 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX1P55347 AC103810.1-201ENST00000579873 453 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AC011471.1-201ENST00000585766 187 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.36□□□□□ -2.03
PKNOX1P55347 AC239868.4-201ENST00000608318 671 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.36□□□□□ -2.03
PKNOX1P55347 AC135507.2-201ENST00000612443 309 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AC034102.8-201ENST00000615146 484 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 AL031667.3-201ENST00000620124 655 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PKNOX1P55347 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PKNOX1P55347 AC016717.2-201ENST00000609089 5141 ntBASIC2.36□□□□□ -2.03
PKNOX1P55347 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKNOX1P55347 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKNOX1P55347 RNU5A-8P-201ENST00000364102 114 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 SNORD114-30-201ENST00000364448 72 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 RNU6-660P-201ENST00000364566 109 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 MIR491-201ENST00000384877 84 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 MIR888-201ENST00000401186 77 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC023141.4-201ENST00000412031 328 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 BTF3L4P3-201ENST00000418879 476 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX1P55347 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC107626.1-201ENST00000471084 183 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 RNA5SP471-201ENST00000516971 106 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 RNA5SP290-201ENST00000517133 127 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 RN7SKP258-201ENST00000517151 304 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 MTATP6P15-201ENST00000527233 835 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AP000907.2-201ENST00000530827 353 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC090888.2-201ENST00000559765 1144 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC025281.1-201ENST00000567026 265 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.35□□□□□ -2.03
PKNOX1P55347 BNIP3P33-201ENST00000598912 569 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 NRBF2P5-201ENST00000603087 788 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 OR2AS2P-201ENST00000606902 342 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC008498.1-201ENST00000613012 531 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC021755.4-201ENST00000616620 456 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AC068787.1-201ENST00000623908 691 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
PKNOX1P55347 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PKNOX1P55347 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 AL137003.2-201ENST00000606924 2538 ntBASIC2.35□□□□□ -2.03
PKNOX1P55347 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PKNOX1P55347 Y_RNA.97-201ENST00000363094 102 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 RNU6-7-201ENST00000364784 107 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 RN7SKP226-201ENST00000364912 300 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 RNU6-8-201ENST00000365467 107 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL122016.1-201ENST00000403365 367 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.34□□□□□ -2.03
PKNOX1P55347 USP9YP13-201ENST00000417797 480 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 Z82209.1-201ENST00000422141 2135 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 SKA2P1-201ENST00000425592 390 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 ELOCP14-201ENST00000428070 331 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 FCF1P1-201ENST00000432690 571 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 MTND1P28-201ENST00000435623 950 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 SNRPEP9-201ENST00000436794 238 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 Z80107.1-201ENST00000436830 412 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL354941.1-201ENST00000438600 464 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 ELOCP7-201ENST00000439968 331 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AL513328.1-201ENST00000446460 224 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.34□□□□□ -2.03
PKNOX1P55347 MTND2P14-201ENST00000482139 351 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 SLC25A15P5-201ENST00000508033 253 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 DEFB108A-201ENST00000530110 222 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX1P55347 AC009097.3-201ENST00000563557 1018 ntBASIC2.34□□□□□ -2.03
PKNOX1P55347 AC090616.3-201ENST00000582184 217 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms