Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 AC090337.1-201ENST00000579651 2074 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 Y_RNA.167-201ENST00000363735 109 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHB4P54760 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 RNU6-985P-201ENST00000410182 104 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC069218.2-201ENST00000411665 344 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AL035423.1-201ENST00000420331 213 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AL139396.1-201ENST00000421137 167 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 OR2AS1P-201ENST00000427827 319 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 CBX3P6-201ENST00000430257 527 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 FABP5P14-201ENST00000437273 393 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 TXNP1-201ENST00000441872 371 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC020550.1-201ENST00000447385 163 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 ELOCP24-201ENST00000456370 334 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC004801.2-202ENST00000463559 283 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 RPL7P43-201ENST00000478876 753 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 Y_RNA.654-201ENST00000497848 106 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 RPS27P27-201ENST00000498779 255 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 UBE2CP3-201ENST00000502715 450 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
EPHB4P54760 CCDC34P1-201ENST00000507441 517 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.38□□□□□ -1.71
EPHB4P54760 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.38□□□□□ -1.71
EPHB4P54760 RNA5SP454-201ENST00000517231 127 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC009902.1-201ENST00000519351 183 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
EPHB4P54760 IMMP1LP2-201ENST00000552954 492 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.38□□□□□ -1.71
EPHB4P54760 COX6CP3-201ENST00000580869 223 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 AF038458.1-201ENST00000588406 262 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.38□□□□□ -1.71
EPHB4P54760 U3.45-201ENST00000607547 219 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 AL390240.1-201ENST00000612950 384 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 AC022418.1-201ENST00000624118 445 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 U6.114-201ENST00000636407 96 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 AL049641.1-201ENST00000441055 1948 ntBASIC4.38□□□□□ -1.71
EPHB4P54760 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
EPHB4P54760 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
EPHB4P54760 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EPHB4P54760 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EPHB4P54760 Y_RNA.149-201ENST00000363558 117 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 SNORD113-7-201ENST00000363762 77 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 UBE2V1P2-201ENST00000397758 440 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 MIR548F4-201ENST00000408515 105 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 RPL7P28-201ENST00000437739 740 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 BX510359.1-201ENST00000456973 237 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 AC106707.2-201ENST00000484182 374 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB4P54760 AC068305.1-201ENST00000497406 726 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 RNA5SP179-201ENST00000517284 121 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB4P54760 YPEL5P3-201ENST00000547227 352 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.37□□□□□ -1.71
EPHB4P54760 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.37□□□□□ -1.71
EPHB4P54760 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.37□□□□□ -1.71
EPHB4P54760 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.37□□□□□ -1.71
EPHB4P54760 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 AC025946.2-201ENST00000603398 234 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 AC091167.4-201ENST00000605079 184 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 Z82243.1-201ENST00000609432 473 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 AC005344.1-201ENST00000613391 459 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 U4.1-201ENST00000620349 87 ntBASIC4.37□□□□□ -1.71
EPHB4P54760 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.37□□□□□ -1.71
EPHB4P54760 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EPHB4P54760 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.37□□□□□ -1.71
EPHB4P54760 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
EPHB4P54760 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB4P54760 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
EPHB4P54760 SNORA60-201ENST00000362396 134 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 RNA5SP502-201ENST00000362694 119 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 RNU6-179P-201ENST00000363350 107 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 RNA5SP391-201ENST00000363456 119 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 Y_RNA.158-201ENST00000363651 101 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EPHB4P54760 RNU6-784P-201ENST00000384330 106 ntBASIC4.36□□□□□ -1.71
EPHB4P54760 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms