Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.86□□□□□ -1.79
CD40P25942 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.86□□□□□ -1.79
CD40P25942 AC023575.1-201ENST00000580510 358 ntBASIC3.86□□□□□ -1.79
CD40P25942 AL360085.1-201ENST00000604713 532 ntBASIC3.86□□□□□ -1.79
CD40P25942 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 AL731566.2-201ENST00000618971 317 ntBASIC3.86□□□□□ -1.79
CD40P25942 U6.99-201ENST00000637524 83 ntBASIC3.86□□□□□ -1.79
CD40P25942 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CD40P25942 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 PNPT1P2-201ENST00000456768 2050 ntBASIC3.86□□□□□ -1.79
CD40P25942 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.86□□□□□ -1.79
CD40P25942 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CD40P25942 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
CD40P25942 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CD40P25942 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 Y_RNA.31-201ENST00000362574 102 ntBASIC3.85□□□□□ -1.79
CD40P25942 HSPE1P26-201ENST00000405341 275 ntBASIC3.85□□□□□ -1.79
CD40P25942 AC011933.1-201ENST00000413334 321 ntBASIC3.85□□□□□ -1.79
CD40P25942 AL096701.2-201ENST00000416920 238 ntBASIC3.85□□□□□ -1.79
CD40P25942 RPL36AP10-201ENST00000421785 322 ntBASIC3.85□□□□□ -1.79
CD40P25942 Z74021.1-201ENST00000423610 407 ntBASIC3.85□□□□□ -1.79
CD40P25942 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.85□□□□□ -1.79
CD40P25942 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 MTND4P19-201ENST00000446659 478 ntBASIC3.85□□□□□ -1.79
CD40P25942 HMGN2P16-201ENST00000456802 261 ntBASIC3.85□□□□□ -1.79
CD40P25942 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.85□□□□□ -1.79
CD40P25942 SNRPGP18-201ENST00000553000 214 ntBASIC3.85□□□□□ -1.79
CD40P25942 AC136624.4-201ENST00000573044 370 ntBASIC3.85□□□□□ -1.79
CD40P25942 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.85□□□□□ -1.79
CD40P25942 AC011494.1-201ENST00000596454 237 ntBASIC3.85□□□□□ -1.79
CD40P25942 AL645944.1-201ENST00000603857 493 ntBASIC3.85□□□□□ -1.79
CD40P25942 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.85□□□□□ -1.79
CD40P25942 RMST_9.1-201ENST00000619945 193 ntBASIC3.85□□□□□ -1.79
CD40P25942 uc_338.22-201ENST00000622722 187 ntBASIC3.85□□□□□ -1.79
CD40P25942 AC027309.3-201ENST00000623419 351 ntBASIC3.85□□□□□ -1.79
CD40P25942 Z69720.2-201ENST00000624755 279 ntBASIC3.85□□□□□ -1.79
CD40P25942 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.85□□□□□ -1.79
CD40P25942 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.85□□□□□ -1.79
CD40P25942 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.85□□□□□ -1.79
CD40P25942 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.85□□□□□ -1.79
CD40P25942 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CD40P25942 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 Y_RNA.202-201ENST00000364083 110 ntBASIC3.84□□□□□ -1.79
CD40P25942 RNU6-1040P-201ENST00000383974 107 ntBASIC3.84□□□□□ -1.79
CD40P25942 RNU6-217P-201ENST00000384164 104 ntBASIC3.84□□□□□ -1.79
CD40P25942 MIR34A-201ENST00000385130 110 ntBASIC3.84□□□□□ -1.79
CD40P25942 MIR3065-201ENST00000390137 79 ntBASIC3.84□□□□□ -1.79
CD40P25942 MIR921-201ENST00000401133 56 ntBASIC3.84□□□□□ -1.79
CD40P25942 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 AL030996.1-201ENST00000411430 235 ntBASIC3.84□□□□□ -1.79
CD40P25942 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.84□□□□□ -1.79
CD40P25942 RPL17P36-201ENST00000420302 549 ntBASIC3.84□□□□□ -1.79
CD40P25942 MTND2P23-201ENST00000422990 651 ntBASIC3.84□□□□□ -1.79
CD40P25942 RPL21P91-201ENST00000429231 479 ntBASIC3.84□□□□□ -1.79
CD40P25942 RPL23AP25-201ENST00000430973 463 ntBASIC3.84□□□□□ -1.79
CD40P25942 HMGB1P12-201ENST00000438594 598 ntBASIC3.84□□□□□ -1.79
CD40P25942 NOTCH2P1-201ENST00000443481 624 ntBASIC3.84□□□□□ -1.79
CD40P25942 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.84□□□□□ -1.79
CD40P25942 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.84□□□□□ -1.79
CD40P25942 PCMTD1P1-201ENST00000455560 355 ntBASIC3.84□□□□□ -1.79
CD40P25942 AC113155.1-201ENST00000511141 769 ntBASIC3.84□□□□□ -1.79
CD40P25942 SMURF2P1-201ENST00000514992 481 ntBASIC3.84□□□□□ -1.79
CD40P25942 RN7SKP46-201ENST00000515942 234 ntBASIC3.84□□□□□ -1.79
CD40P25942 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 MTCO3P13-201ENST00000577757 781 ntBASIC3.84□□□□□ -1.79
CD40P25942 FTX_3.1-201ENST00000610451 147 ntBASIC3.84□□□□□ -1.79
CD40P25942 MIR6716-201ENST00000613413 80 ntBASIC3.84□□□□□ -1.79
CD40P25942 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 uc_338.13-201ENST00000618243 179 ntBASIC3.84□□□□□ -1.79
CD40P25942 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.84□□□□□ -1.79
CD40P25942 AC048347.1-201ENST00000624621 427 ntBASIC3.84□□□□□ -1.79
CD40P25942 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CD40P25942 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 MAPK10-303ENST00000641324 3959 ntBASIC3.84□□□□□ -1.79
CD40P25942 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CD40P25942 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CD40P25942 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.84□□□□□ -1.79
CD40P25942 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms