Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL627309.6-201ENST00000606857 840 ntBASIC4.08□□□□□ -1.76
XPAP23025 MIR15A-201ENST00000607334 83 ntBASIC4.08□□□□□ -1.76
XPAP23025 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
XPAP23025 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.08□□□□□ -1.76
XPAP23025 AL360181.4-201ENST00000621752 134 ntBASIC4.08□□□□□ -1.76
XPAP23025 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
XPAP23025 OR4G2P-202ENST00000641004 1759 ntBASIC4.08□□□□□ -1.76
XPAP23025 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
XPAP23025 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
XPAP23025 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 RNU5A-1-201ENST00000362698 116 ntBASIC4.07□□□□□ -1.76
XPAP23025 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.07□□□□□ -1.76
XPAP23025 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 SNORD116-29-201ENST00000384516 83 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR1302-11-201ENST00000408051 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR1302-9-201ENST00000408365 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR548K-201ENST00000408406 116 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR1251-201ENST00000408552 70 ntBASIC4.07□□□□□ -1.76
XPAP23025 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR1302-10-201ENST00000408734 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 RPS12P24-201ENST00000412619 387 ntBASIC4.07□□□□□ -1.76
XPAP23025 VN1R36P-201ENST00000414936 291 ntBASIC4.07□□□□□ -1.76
XPAP23025 SAR1AP4-201ENST00000429225 591 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 AL358472.1-201ENST00000431295 329 ntBASIC4.07□□□□□ -1.76
XPAP23025 HLA-N-201ENST00000437516 135 ntBASIC4.07□□□□□ -1.76
XPAP23025 MTCYBP6-201ENST00000441810 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.07□□□□□ -1.76
XPAP23025 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.07□□□□□ -1.76
XPAP23025 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC087884.1-201ENST00000469738 328 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC006517.1-201ENST00000480485 328 ntBASIC4.07□□□□□ -1.76
XPAP23025 AP002812.1-201ENST00000495378 474 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC146944.2-203ENST00000502493 354 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.07□□□□□ -1.76
XPAP23025 AC139495.1-202ENST00000513164 354 ntBASIC4.07□□□□□ -1.76
XPAP23025 AC026402.1-201ENST00000513642 170 ntBASIC4.07□□□□□ -1.76
XPAP23025 RNU6-566P-201ENST00000516790 107 ntBASIC4.07□□□□□ -1.76
XPAP23025 SNORA25.17-201ENST00000517184 124 ntBASIC4.07□□□□□ -1.76
XPAP23025 RN7SKP289-201ENST00000517244 295 ntBASIC4.07□□□□□ -1.76
XPAP23025 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XPAP23025 SNRPGP16-201ENST00000533275 226 ntBASIC4.07□□□□□ -1.76
XPAP23025 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.07□□□□□ -1.76
XPAP23025 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.07□□□□□ -1.76
XPAP23025 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XPAP23025 AC022432.1-201ENST00000595739 310 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR1302-2-201ENST00000607096 138 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR6868-201ENST00000611215 58 ntBASIC4.07□□□□□ -1.76
XPAP23025 FAM157A-202ENST00000615155 405 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR7151-201ENST00000617477 60 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR6875-201ENST00000617506 72 ntBASIC4.07□□□□□ -1.76
XPAP23025 MIR6500-201ENST00000622700 86 ntBASIC4.07□□□□□ -1.76
XPAP23025 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
XPAP23025 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.07□□□□□ -1.76
XPAP23025 LINC02471-203ENST00000641941 4752 ntBASIC4.07□□□□□ -1.76
XPAP23025 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
XPAP23025 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XPAP23025 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
XPAP23025 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
XPAP23025 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.06□□□□□ -1.76
XPAP23025 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
XPAP23025 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
XPAP23025 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.06□□□□□ -1.76
XPAP23025 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
XPAP23025 RNA5SP515-201ENST00000364570 118 ntBASIC4.06□□□□□ -1.76
XPAP23025 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
XPAP23025 RNU6-817P-201ENST00000391083 104 ntBASIC4.06□□□□□ -1.76
XPAP23025 RPS4XP7-201ENST00000406274 780 ntBASIC4.06□□□□□ -1.76
XPAP23025 AC091390.3-201ENST00000426478 338 ntBASIC4.06□□□□□ -1.76
XPAP23025 AC005534.2-201ENST00000431047 433 ntBASIC4.06□□□□□ -1.76
XPAP23025 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.06□□□□□ -1.76
XPAP23025 PRDX3P3-201ENST00000447765 522 ntBASIC4.06□□□□□ -1.76
XPAP23025 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.06□□□□□ -1.76
XPAP23025 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.06□□□□□ -1.76
XPAP23025 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.06□□□□□ -1.76
XPAP23025 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
XPAP23025 AC012181.1-201ENST00000479895 423 ntBASIC4.06□□□□□ -1.76
XPAP23025 MTCO1P29-201ENST00000496868 288 ntBASIC4.06□□□□□ -1.76
XPAP23025 AC006499.6-201ENST00000511169 607 ntBASIC4.06□□□□□ -1.76
XPAP23025 RNA5SP471-201ENST00000516971 106 ntBASIC4.06□□□□□ -1.76
XPAP23025 COPS8P3-201ENST00000526024 482 ntBASIC4.06□□□□□ -1.76
XPAP23025 AP003072.1-201ENST00000531740 145 ntBASIC4.06□□□□□ -1.76
XPAP23025 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.06□□□□□ -1.76
XPAP23025 AC091516.1-201ENST00000549191 703 ntBASIC4.06□□□□□ -1.76
XPAP23025 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.06□□□□□ -1.76
XPAP23025 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.06□□□□□ -1.76
XPAP23025 AP001330.4-201ENST00000604350 154 ntBASIC4.06□□□□□ -1.76
XPAP23025 U2.17-201ENST00000611454 95 ntBASIC4.06□□□□□ -1.76
XPAP23025 MIR7154-201ENST00000620673 73 ntBASIC4.06□□□□□ -1.76
XPAP23025 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.06□□□□□ -1.76
XPAP23025 AC011266.1-201ENST00000624119 3569 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms