Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NDUFB4P2-201ENST00000509515 391 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RNA5SP367-201ENST00000516557 118 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 BTF3P12-201ENST00000519620 469 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC005046.1-201ENST00000608515 625 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 AP002791.1-201ENST00000623291 381 ntBASIC2.77□□□□□ -1.97
HLA-DPA1P20036 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPA1P20036 MTND4P27-201ENST00000450813 1354 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 SNORD113-6-201ENST00000363345 75 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 U8.14-201ENST00000390843 143 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AL138827.1-201ENST00000402666 306 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 RNA5SP21-201ENST00000410917 96 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 NEFMP1-201ENST00000443423 1006 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 HMGN2P10-201ENST00000448085 265 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 MTATP6P7-201ENST00000453315 681 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 RNU7-26P-201ENST00000458980 63 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 SNORD11.1-201ENST00000459482 85 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AL049873.1-201ENST00000480540 376 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC139453.3-201ENST00000493276 369 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 CYCSP39-201ENST00000565821 309 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 MIR3146-201ENST00000580367 79 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AP001004.1-201ENST00000582468 324 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC005261.5-201ENST00000596280 355 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC024933.1-201ENST00000608472 348 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC011939.3-201ENST00000613686 466 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 AC084035.1-201ENST00000634543 607 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.76□□□□□ -1.97
HLA-DPA1P20036 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPA1P20036 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AL391994.1-201ENST00000254724 282 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 ANAPC10P1-201ENST00000395991 556 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 SEPT2P1-201ENST00000419651 180 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC013410.2-201ENST00000422627 201 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 MTND4P25-201ENST00000441039 533 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 Z73417.1-201ENST00000447373 778 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC072039.1-201ENST00000477611 581 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 GZMAP1-201ENST00000503054 631 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC023141.11-201ENST00000508864 202 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC116347.2-201ENST00000514912 523 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 SNORA31.6-201ENST00000516241 130 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 RNU6-703P-201ENST00000516946 107 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 RPS3AP4-201ENST00000555161 764 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC023824.2-201ENST00000566185 400 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AGGF1P5-201ENST00000567900 919 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 MIR3167-201ENST00000579623 85 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AL033523.1-201ENST00000605153 153 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 ATP1B3P1-201ENST00000605365 821 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC007619.2-201ENST00000605743 379 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC027449.1-201ENST00000608890 407 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC068787.1-201ENST00000623908 691 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 CR381653.2-201ENST00000624041 768 ntBASIC2.75□□□□□ -1.97
HLA-DPA1P20036 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPA1P20036 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 NACAP2-201ENST00000318548 624 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RNU6-660P-201ENST00000364566 109 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RNY3P13-201ENST00000365542 102 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RNU6-14P-201ENST00000384630 106 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RNU2-62P-201ENST00000410868 191 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AL139281.1-201ENST00000422120 335 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 RAC1P6-201ENST00000423911 575 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 MTCO3P30-201ENST00000426425 670 ntBASIC2.74□□□□□ -1.97
HLA-DPA1P20036 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPA1P20036 AC112220.1-201ENST00000434628 355 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms