Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.91□□□□□ -2.26
HMGA1P17096 AL359385.1-201ENST00000456509 365 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.91□□□□□ -2.26
HMGA1P17096 AC021087.2-201ENST00000504656 1203 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGA1P17096 AC008834.1-201ENST00000511612 175 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 NDUFA5P6-201ENST00000542110 379 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 AC087481.2-201ENST00000565492 330 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGA1P17096 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.91□□□□□ -2.26
HMGA1P17096 AC005498.1-201ENST00000592125 465 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 XIAPP1-201ENST00000603162 600 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGA1P17096 AL360181.4-201ENST00000621752 134 ntBASIC0.91□□□□□ -2.26
HMGA1P17096 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
HMGA1P17096 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
HMGA1P17096 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
HMGA1P17096 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
HMGA1P17096 AC007785.2-201ENST00000598627 1916 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HMGA1P17096 RNU6-220P-201ENST00000390919 107 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 AL356131.1-201ENST00000405826 414 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGA1P17096 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGA1P17096 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.9□□□□□ -2.27
HMGA1P17096 AL365496.1-201ENST00000426885 215 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGA1P17096 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGA1P17096 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.9□□□□□ -2.27
HMGA1P17096 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.9□□□□□ -2.27
HMGA1P17096 RPL21P134-201ENST00000453468 483 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 RPL31P58-201ENST00000469001 379 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.9□□□□□ -2.27
HMGA1P17096 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGA1P17096 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.9□□□□□ -2.27
HMGA1P17096 AC079148.1-201ENST00000565944 819 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 MTND4LP24-201ENST00000572277 291 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 AC018630.2-201ENST00000534866 2403 ntBASIC0.9□□□□□ -2.27
HMGA1P17096 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
HMGA1P17096 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 AC098614.2-201ENST00000426040 255 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 AC016691.1-201ENST00000441321 413 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 RPS4XP11-201ENST00000446897 772 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 snoU13.7-201ENST00000459220 104 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGA1P17096 CBX3P3-201ENST00000508108 532 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGA1P17096 PRR13P7-201ENST00000605538 430 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 AL592148.2-201ENST00000612210 372 ntBASIC0.89□□□□□ -2.27
HMGA1P17096 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGA1P17096 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGA1P17096 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HMGA1P17096 RNU6-317P-201ENST00000384031 107 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HMGA1P17096 BTF3L4P2-201ENST00000392798 346 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 AL109913.1-201ENST00000421173 514 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGA1P17096 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGA1P17096 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HMGA1P17096 AC104108.1-201ENST00000509930 412 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 RNA5SP384-201ENST00000516615 116 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 RRN3P3-201ENST00000549207 578 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 HSPE1P4-201ENST00000550617 308 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGA1P17096 AP005136.1-201ENST00000579765 429 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGA1P17096 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.88□□□□□ -2.27
HMGA1P17096 LINC00216-201ENST00000623548 1126 ntBASIC0.88□□□□□ -2.27
HMGA1P17096 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HMGA1P17096 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMGA1P17096 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGA1P17096 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HMGA1P17096 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.87□□□□□ -2.27
HMGA1P17096 TOMM22P2-201ENST00000430735 237 ntBASIC0.87□□□□□ -2.27
HMGA1P17096 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGA1P17096 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGA1P17096 AC093752.1-206ENST00000511823 336 ntBASIC0.87□□□□□ -2.27
HMGA1P17096 AC008676.3-201ENST00000521237 435 ntBASIC0.87□□□□□ -2.27
HMGA1P17096 SNRPGP16-201ENST00000533275 226 ntBASIC0.87□□□□□ -2.27
HMGA1P17096 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.87□□□□□ -2.27
HMGA1P17096 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.87□□□□□ -2.27
HMGA1P17096 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMGA1P17096 AP003476.1-201ENST00000623984 516 ntBASIC0.87□□□□□ -2.27
HMGA1P17096 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
HMGA1P17096 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
HMGA1P17096 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.86□□□□□ -2.27
HMGA1P17096 ZNF29P-201ENST00000225587 168 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 RNU6-666P-201ENST00000363499 107 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 RNY1-201ENST00000364228 113 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 AL158823.1-201ENST00000418441 478 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 RPL30P13-201ENST00000418873 348 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 AC092634.2-201ENST00000428146 1010 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGA1P17096 UBE2V1P5-201ENST00000440070 405 ntBASIC0.86□□□□□ -2.27
HMGA1P17096 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms