Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL356379.1-201ENST00000414105 126 ntBASIC1.61□□□□□ -2.15
CFTRP13569 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.61□□□□□ -2.15
CFTRP13569 AC004941.2-201ENST00000427009 228 ntBASIC1.61□□□□□ -2.15
CFTRP13569 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.61□□□□□ -2.15
CFTRP13569 AL034418.1-201ENST00000448675 860 ntBASIC1.61□□□□□ -2.15
CFTRP13569 PSPHP1-201ENST00000450062 261 ntBASIC1.61□□□□□ -2.15
CFTRP13569 AL049870.4-201ENST00000555741 486 ntBASIC1.61□□□□□ -2.15
CFTRP13569 MIR3609-201ENST00000582661 80 ntBASIC1.61□□□□□ -2.15
CFTRP13569 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.61□□□□□ -2.15
CFTRP13569 AL050343.2-201ENST00000607338 280 ntBASIC1.61□□□□□ -2.15
CFTRP13569 AL162373.1-201ENST00000620433 407 ntBASIC1.61□□□□□ -2.15
CFTRP13569 AL390862.1-201ENST00000635467 1469 ntBASIC1.61□□□□□ -2.15
CFTRP13569 CR848007.1-201ENST00000442354 1699 ntBASIC1.61□□□□□ -2.15
CFTRP13569 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CFTRP13569 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.6□□□□□ -2.15
CFTRP13569 AL365496.1-201ENST00000426885 215 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AL596276.1-201ENST00000434465 418 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.6□□□□□ -2.15
CFTRP13569 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.6□□□□□ -2.15
CFTRP13569 AC096751.1-202ENST00000502691 1067 ntBASIC1.6□□□□□ -2.15
CFTRP13569 RNF138P1-201ENST00000502765 546 ntBASIC1.6□□□□□ -2.15
CFTRP13569 CBX3P3-201ENST00000508108 532 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.6□□□□□ -2.15
CFTRP13569 AL512605.2-201ENST00000592972 256 ntBASIC1.6□□□□□ -2.15
CFTRP13569 FAM71BP1-201ENST00000604431 523 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AC011330.2-201ENST00000621680 635 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AL138955.1-201ENST00000622881 1040 ntBASIC1.6□□□□□ -2.15
CFTRP13569 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CFTRP13569 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
CFTRP13569 AC087359.1-201ENST00000508335 1740 ntBASIC1.59□□□□□ -2.15
CFTRP13569 U3.20-201ENST00000390909 217 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.59□□□□□ -2.15
CFTRP13569 OR6C66P-201ENST00000414917 930 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AC008850.1-201ENST00000427546 362 ntBASIC1.59□□□□□ -2.15
CFTRP13569 RPL7L1P10-201ENST00000427790 463 ntBASIC1.59□□□□□ -2.15
CFTRP13569 ARF4P4-201ENST00000439608 520 ntBASIC1.59□□□□□ -2.15
CFTRP13569 OR6K5P-201ENST00000447050 945 ntBASIC1.59□□□□□ -2.15
CFTRP13569 NDUFB4P2-201ENST00000509515 391 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AP004247.1-201ENST00000531556 1289 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AC008127.2-201ENST00000549925 1075 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AC020658.4-201ENST00000613987 684 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.59□□□□□ -2.15
CFTRP13569 AC091932.3-201ENST00000624223 323 ntBASIC1.59□□□□□ -2.15
CFTRP13569 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.59□□□□□ -2.15
CFTRP13569 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CFTRP13569 OR1L1-202ENST00000373686 1083 ntBASIC1.58□□□□□ -2.16
CFTRP13569 RNU6-198P-201ENST00000384258 104 ntBASIC1.58□□□□□ -2.16
CFTRP13569 MIR17-201ENST00000385012 84 ntBASIC1.58□□□□□ -2.16
CFTRP13569 RPL21P90-201ENST00000415692 466 ntBASIC1.58□□□□□ -2.16
CFTRP13569 EZH2P1-201ENST00000431167 291 ntBASIC1.58□□□□□ -2.16
CFTRP13569 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CFTRP13569 TRGVB-201ENST00000453257 471 ntBASIC1.58□□□□□ -2.16
CFTRP13569 AC104685.1-201ENST00000502445 371 ntBASIC1.58□□□□□ -2.16
CFTRP13569 AC067904.2-201ENST00000517322 1283 ntBASIC1.58□□□□□ -2.16
CFTRP13569 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.58□□□□□ -2.16
CFTRP13569 AC008749.1-201ENST00000597650 306 ntBASIC1.58□□□□□ -2.16
CFTRP13569 AC123912.3-201ENST00000600907 1367 ntBASIC1.58□□□□□ -2.16
CFTRP13569 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CFTRP13569 RNU6-31P-201ENST00000384388 108 ntBASIC1.57□□□□□ -2.16
CFTRP13569 U3.29-201ENST00000391296 212 ntBASIC1.57□□□□□ -2.16
CFTRP13569 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.57□□□□□ -2.16
CFTRP13569 AL627224.1-201ENST00000448334 444 ntBASIC1.57□□□□□ -2.16
CFTRP13569 RPS15AP27-201ENST00000449183 343 ntBASIC1.57□□□□□ -2.16
CFTRP13569 BX248409.1-201ENST00000455497 255 ntBASIC1.57□□□□□ -2.16
CFTRP13569 ANKRD26P4-201ENST00000455755 950 ntBASIC1.57□□□□□ -2.16
CFTRP13569 PNPLA4P1-201ENST00000458328 305 ntBASIC1.57□□□□□ -2.16
CFTRP13569 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.57□□□□□ -2.16
CFTRP13569 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.57□□□□□ -2.16
CFTRP13569 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.57□□□□□ -2.16
CFTRP13569 AC079395.3-201ENST00000615161 484 ntBASIC1.57□□□□□ -2.16
CFTRP13569 AC018630.2-201ENST00000534866 2403 ntBASIC1.57□□□□□ -2.16
CFTRP13569 HMGB3P31-201ENST00000413333 595 ntBASIC1.56□□□□□ -2.16
CFTRP13569 SNORD56-201ENST00000413522 71 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.56□□□□□ -2.16
CFTRP13569 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.56□□□□□ -2.16
CFTRP13569 DEFB108E-201ENST00000524692 240 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.56□□□□□ -2.16
CFTRP13569 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.56□□□□□ -2.16
CFTRP13569 AC079148.1-201ENST00000565944 819 ntBASIC1.56□□□□□ -2.16
CFTRP13569 MIR4698-201ENST00000577795 80 ntBASIC1.56□□□□□ -2.16
CFTRP13569 MIR3616-201ENST00000584070 92 ntBASIC1.56□□□□□ -2.16
CFTRP13569 SNORD14A-201ENST00000606526 91 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AC107214.2-201ENST00000608204 634 ntBASIC1.56□□□□□ -2.16
CFTRP13569 RNU6-1074P-201ENST00000383995 104 ntBASIC1.56□□□□□ -2.16
CFTRP13569 RNU6-920P-201ENST00000410926 92 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AC092745.2-202ENST00000411880 369 ntBASIC1.56□□□□□ -2.16
CFTRP13569 RPS15AP38-201ENST00000413110 372 ntBASIC1.56□□□□□ -2.16
CFTRP13569 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CFTRP13569 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.56□□□□□ -2.16
CFTRP13569 COL6A4P2-205ENST00000509855 506 ntBASIC1.56□□□□□ -2.16
CFTRP13569 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.56□□□□□ -2.16
CFTRP13569 MRPS33P3-201ENST00000513456 322 ntBASIC1.56□□□□□ -2.16
CFTRP13569 CBX3P8-201ENST00000532412 525 ntBASIC1.56□□□□□ -2.16
CFTRP13569 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.56□□□□□ -2.16
CFTRP13569 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.56□□□□□ -2.16
CFTRP13569 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AL513185.3-201ENST00000433335 1300 ntBASIC1.56□□□□□ -2.16
CFTRP13569 AL137003.2-201ENST00000606924 2538 ntBASIC1.55□□□□□ -2.16
CFTRP13569 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
CFTRP13569 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms