Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.93□□□□□ -1.62
BMP3P12645 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BMP3P12645 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BMP3P12645 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BMP3P12645 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
BMP3P12645 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.93□□□□□ -1.62
BMP3P12645 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.92□□□□□ -1.62
BMP3P12645 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.92□□□□□ -1.62
BMP3P12645 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
BMP3P12645 RNY1-201ENST00000364228 113 ntBASIC4.92□□□□□ -1.62
BMP3P12645 Y_RNA.297-201ENST00000364950 91 ntBASIC4.92□□□□□ -1.62
BMP3P12645 RNU6-1329P-201ENST00000365664 107 ntBASIC4.92□□□□□ -1.62
BMP3P12645 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 RNU6-701P-201ENST00000384059 107 ntBASIC4.92□□□□□ -1.62
BMP3P12645 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 RNU2-22P-201ENST00000411266 212 ntBASIC4.92□□□□□ -1.62
BMP3P12645 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 AL356095.1-201ENST00000417217 199 ntBASIC4.92□□□□□ -1.62
BMP3P12645 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 AL139109.1-201ENST00000455491 297 ntBASIC4.92□□□□□ -1.62
BMP3P12645 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.92□□□□□ -1.62
BMP3P12645 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 AP000942.1-201ENST00000463969 747 ntBASIC4.92□□□□□ -1.62
BMP3P12645 RPL7AP28-201ENST00000464513 571 ntBASIC4.92□□□□□ -1.62
BMP3P12645 RNU6-27P-201ENST00000516146 107 ntBASIC4.92□□□□□ -1.62
BMP3P12645 RNU7-4P-201ENST00000516961 62 ntBASIC4.92□□□□□ -1.62
BMP3P12645 HMGN1P28-201ENST00000521340 364 ntBASIC4.92□□□□□ -1.62
BMP3P12645 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.92□□□□□ -1.62
BMP3P12645 MIR6867-201ENST00000610636 67 ntBASIC4.92□□□□□ -1.62
BMP3P12645 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 AP001282.2-201ENST00000616149 309 ntBASIC4.92□□□□□ -1.62
BMP3P12645 SNX18P1Y-201ENST00000616231 511 ntBASIC4.92□□□□□ -1.62
BMP3P12645 MIR6864-201ENST00000617935 70 ntBASIC4.92□□□□□ -1.62
BMP3P12645 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BMP3P12645 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
BMP3P12645 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.91□□□□□ -1.62
BMP3P12645 AL049555.1-201ENST00000562834 1933 ntBASIC4.91□□□□□ -1.62
BMP3P12645 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
BMP3P12645 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AL592182.3-201ENST00000642132 3304 ntBASIC4.91□□□□□ -1.62
BMP3P12645 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 AC093849.1-201ENST00000563631 2209 ntBASIC4.91□□□□□ -1.62
BMP3P12645 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 Y_RNA.48-201ENST00000362710 103 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RNA5SP22-201ENST00000365393 109 ntBASIC4.91□□□□□ -1.62
BMP3P12645 Y_RNA.464-201ENST00000384282 110 ntBASIC4.91□□□□□ -1.62
BMP3P12645 SNORD58.1-201ENST00000391313 66 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RNU6-121P-201ENST00000410525 99 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RN7SKP27-201ENST00000410684 333 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RPL21P38-201ENST00000418090 167 ntBASIC4.91□□□□□ -1.62
BMP3P12645 MYL8P-204ENST00000431574 518 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RPL23AP33-201ENST00000442301 452 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BMP3P12645 AC091153.1-201ENST00000466297 402 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC104164.2-201ENST00000496953 495 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.91□□□□□ -1.62
BMP3P12645 Y_RNA.689-201ENST00000516589 107 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RNU6-255P-201ENST00000516957 105 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.91□□□□□ -1.62
BMP3P12645 AC012119.1-201ENST00000603184 222 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC002044.1-201ENST00000606707 158 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.91□□□□□ -1.62
BMP3P12645 AC007998.5-201ENST00000622938 237 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC127459.3-201ENST00000624328 466 ntBASIC4.91□□□□□ -1.62
BMP3P12645 AC132825.6-201ENST00000638861 357 ntBASIC4.91□□□□□ -1.62
BMP3P12645 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.91□□□□□ -1.62
BMP3P12645 AC027228.2-201ENST00000567141 2154 ntBASIC4.91□□□□□ -1.62
BMP3P12645 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.91□□□□□ -1.62
BMP3P12645 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BMP3P12645 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
BMP3P12645 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BMP3P12645 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
BMP3P12645 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
BMP3P12645 MIR372-201ENST00000362225 67 ntBASIC4.9□□□□□ -1.63
BMP3P12645 RNA5SP130-201ENST00000364431 114 ntBASIC4.9□□□□□ -1.63
BMP3P12645 SNORD113-1-201ENST00000365321 69 ntBASIC4.9□□□□□ -1.63
BMP3P12645 SNORD51-201ENST00000384320 80 ntBASIC4.9□□□□□ -1.63
BMP3P12645 RNU11-4P-201ENST00000391149 133 ntBASIC4.9□□□□□ -1.63
BMP3P12645 RNU2-33P-201ENST00000410344 192 ntBASIC4.9□□□□□ -1.63
BMP3P12645 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.9□□□□□ -1.63
BMP3P12645 RPS23P10-201ENST00000416185 486 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms