Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL360085.1-201ENST00000604713 532 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 AC021646.1-201ENST00000605469 484 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 SNORD14A-201ENST00000606526 91 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.12□□□□□ -2.23
TOP2AP11388 AL136313.1-201ENST00000624804 202 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 MIR6866-201ENST00000638146 69 ntBASIC1.12□□□□□ -2.23
TOP2AP11388 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TOP2AP11388 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TOP2AP11388 RNU6-16P-201ENST00000384385 107 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 AC092628.1-201ENST00000436250 252 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 AC021146.2-201ENST00000504736 556 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 SNORA31.18-201ENST00000517043 134 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 FAM60BP-201ENST00000578364 658 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 SNRPGP15-201ENST00000600149 222 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 AP003476.1-201ENST00000623984 516 ntBASIC1.11□□□□□ -2.23
TOP2AP11388 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.1□□□□□ -2.23
TOP2AP11388 HMGB1P9-201ENST00000429856 646 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 C1DP3-201ENST00000455013 423 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 ANKRD26P4-201ENST00000455755 950 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 AC010301.1-201ENST00000473936 355 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.1□□□□□ -2.23
TOP2AP11388 AC093752.1-206ENST00000511823 336 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 RNU7-193P-201ENST00000516723 65 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.1□□□□□ -2.23
TOP2AP11388 SULT1C2P1-202ENST00000562418 459 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 AL161912.3-201ENST00000605404 628 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 CR382285.2-201ENST00000624662 1495 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.1□□□□□ -2.23
TOP2AP11388 AC244098.2-201ENST00000422068 99 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.1□□□□□ -2.23
TOP2AP11388 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.1□□□□□ -2.23
TOP2AP11388 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.1□□□□□ -2.23
TOP2AP11388 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.1□□□□□ -2.23
TOP2AP11388 MIR8087-201ENST00000612745 78 ntBASIC1.1□□□□□ -2.23
TOP2AP11388 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.1□□□□□ -2.23
TOP2AP11388 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TOP2AP11388 RNA5SP347-201ENST00000362445 119 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AC069277.2-201ENST00000454211 432 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AC139453.3-201ENST00000493276 369 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AC112198.4-201ENST00000515450 351 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 RNU6-496P-201ENST00000516145 99 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.09□□□□□ -2.24
TOP2AP11388 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.09□□□□□ -2.24
TOP2AP11388 AC025165.5-201ENST00000602802 578 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AC009229.3-201ENST00000608056 282 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 AL138880.2-201ENST00000616214 239 ntBASIC1.09□□□□□ -2.24
TOP2AP11388 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TOP2AP11388 ELL2P3-201ENST00000457883 1602 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 RNU6-492P-201ENST00000363035 104 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 AL138880.1-201ENST00000405824 642 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 RNU6-920P-201ENST00000410926 92 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.08□□□□□ -2.24
TOP2AP11388 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.08□□□□□ -2.24
TOP2AP11388 DUSP12P1-201ENST00000612874 516 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 AC022513.1-201ENST00000624512 117 ntBASIC1.08□□□□□ -2.24
TOP2AP11388 MIR92A2-201ENST00000385299 75 ntBASIC1.07□□□□□ -2.24
TOP2AP11388 RPL23AP6-201ENST00000446637 472 ntBASIC1.07□□□□□ -2.24
TOP2AP11388 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.07□□□□□ -2.24
TOP2AP11388 COL6A4P2-205ENST00000509855 506 ntBASIC1.07□□□□□ -2.24
TOP2AP11388 AL109933.3-201ENST00000619095 188 ntBASIC1.07□□□□□ -2.24
TOP2AP11388 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
TOP2AP11388 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TOP2AP11388 TATDN1P1-201ENST00000414123 891 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 RPL39P29-201ENST00000447779 157 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 AP003072.2-201ENST00000527756 676 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 CYP4A27P-201ENST00000567218 190 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 AP001485.1-201ENST00000604799 199 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TOP2AP11388 AC243829.3-201ENST00000622177 108 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TOP2AP11388 AP001350.1-201ENST00000601906 1524 ntBASIC1.06□□□□□ -2.24
TOP2AP11388 ZNF29P-201ENST00000225587 168 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 RNU6-670P-201ENST00000364312 104 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 RNA5SP252-201ENST00000391131 119 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 RPL23AP3-201ENST00000453844 468 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AP001960.1-201ENST00000506494 658 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.05□□□□□ -2.24
TOP2AP11388 RNU2-19P-201ENST00000517288 84 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.05□□□□□ -2.24
TOP2AP11388 RPL30P13-201ENST00000418873 348 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AL358176.2-201ENST00000425769 204 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 TRGVB-201ENST00000453257 471 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.05□□□□□ -2.24
TOP2AP11388 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.05□□□□□ -2.24
TOP2AP11388 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TOP2AP11388 AP005639.2-201ENST00000527592 928 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AP003484.1-201ENST00000530974 250 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.05□□□□□ -2.24
TOP2AP11388 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.05□□□□□ -2.24
TOP2AP11388 AC090616.5-202ENST00000582111 297 ntBASIC1.05□□□□□ -2.24
TOP2AP11388 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
TOP2AP11388 Y_RNA.68-201ENST00000362881 102 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TOP2AP11388 MTND5P15-201ENST00000434246 349 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 CENPUP2-201ENST00000555897 1186 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 AC006270.3-201ENST00000605967 1036 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 AC025594.3-201ENST00000613068 790 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 AC110079.1-202ENST00000635213 138 ntBASIC1.04□□□□□ -2.24
TOP2AP11388 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms