Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC093809.1-201ENST00000509155 340 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND4P03905 SCARNA17.1-201ENST00000516211 143 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 RNU6-390P-201ENST00000516259 103 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 SCARNA17.2-201ENST00000516334 143 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AL133153.1-201ENST00000557756 303 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 SNORD53-201ENST00000579969 78 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AL158042.1-201ENST00000605338 460 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AC106052.1-201ENST00000608029 497 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AL391834.2-201ENST00000609982 546 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 SCARNA17.4-201ENST00000614296 143 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND4P03905 AC068057.2-201ENST00000624047 895 ntBASIC1.97□□□□□ -2.09
MT-ND4P03905 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.97□□□□□ -2.09
MT-ND4P03905 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
MT-ND4P03905 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MT-ND4P03905 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND4P03905 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND4P03905 SNORA4.1-201ENST00000364263 144 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 MIR19A-201ENST00000384878 82 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND4P03905 CCNG1P1-201ENST00000406783 885 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AL359704.1-201ENST00000411586 781 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND4P03905 USP9YP13-201ENST00000417797 480 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 ELOCP9-201ENST00000418624 239 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 BTF3L4P3-201ENST00000418879 476 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 MTCO2P23-201ENST00000425216 680 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC007560.1-201ENST00000426912 237 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 USP12PX-201ENST00000432383 1057 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 USP9YP24-201ENST00000434374 697 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 RPS15AP28-201ENST00000435088 386 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND4P03905 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 USP9YP17-201ENST00000444617 696 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND4P03905 AC020550.1-201ENST00000447385 163 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AL009048.1-201ENST00000450437 298 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND4P03905 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC105252.1-201ENST00000503089 286 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 UBE2V1P12-201ENST00000503954 474 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND4P03905 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 RPL7P20-201ENST00000520308 745 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND4P03905 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.96□□□□□ -2.1
MT-ND4P03905 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND4P03905 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND4P03905 AL359212.1-201ENST00000556608 614 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC105137.2-201ENST00000569073 466 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND4P03905 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND4P03905 AC007621.1-201ENST00000604544 437 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AL592221.1-201ENST00000605266 382 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AC239868.4-201ENST00000608318 671 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 AC012150.2-201ENST00000621300 544 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 AP000676.3-201ENST00000623299 569 ntBASIC1.96□□□□□ -2.1
MT-ND4P03905 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.96□□□□□ -2.1
MT-ND4P03905 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND4P03905 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND4P03905 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MT-ND4P03905 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MT-ND4P03905 FAM133CP-201ENST00000332869 704 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 SNORA5B-201ENST00000363786 132 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
MT-ND4P03905 RNU6-906P-201ENST00000384700 70 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 MIR483-201ENST00000385070 76 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 Z92545.1-201ENST00000411782 234 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 RPL21P24-201ENST00000413752 448 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 NPM1P11-201ENST00000417106 855 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 USP9YP26-201ENST00000421008 661 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 RPL23AP83-201ENST00000434984 473 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 SNRPEP9-201ENST00000436794 238 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AL831737.1-201ENST00000441288 271 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 FAM103A2P-201ENST00000444122 354 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC004924.1-201ENST00000480160 781 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND4P03905 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND4P03905 MTND5P13-201ENST00000513046 1079 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC110760.3-202ENST00000515177 371 ntBASIC1.95□□□□□ -2.1
MT-ND4P03905 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms