Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC007919.1-201ENST00000429380 217 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 SETP8-201ENST00000435341 628 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 TPT1P14-201ENST00000448018 505 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.86□□□□□ -1.95
PDGFBP01127 RPL30P6-201ENST00000475925 342 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC233702.1-201ENST00000482905 502 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.86□□□□□ -1.95
PDGFBP01127 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 AC135721.1-201ENST00000497954 479 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC108210.2-201ENST00000503681 201 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.86□□□□□ -1.95
PDGFBP01127 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AP000907.2-201ENST00000530827 353 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.86□□□□□ -1.95
PDGFBP01127 AC128657.1-201ENST00000549459 145 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 PCMTD1P2-201ENST00000565017 355 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
PDGFBP01127 UBE2L4-201ENST00000587688 464 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 TPMTP1-201ENST00000592307 737 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFBP01127 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.86□□□□□ -1.95
PDGFBP01127 AL158801.5-201ENST00000623123 465 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 MTND1P37-201ENST00000636562 264 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 MTND5P7-201ENST00000413558 1798 ntBASIC2.86□□□□□ -1.95
PDGFBP01127 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFBP01127 Y_RNA.97-201ENST00000363094 102 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 SNORD114-30-201ENST00000364448 72 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 NDUFB4P5-201ENST00000415445 361 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 RPL23AP39-201ENST00000415533 405 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 RPS27AP14-201ENST00000422868 454 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 AC098614.2-201ENST00000426040 255 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 RPS12P18-201ENST00000442381 270 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 DDX3P2-201ENST00000446138 111 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 COX6CP12-201ENST00000446748 202 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFBP01127 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.85□□□□□ -1.95
PDGFBP01127 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFBP01127 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFBP01127 RNU6-390P-201ENST00000516259 103 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFBP01127 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 AC068587.4-201ENST00000533893 186 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.85□□□□□ -1.95
PDGFBP01127 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.85□□□□□ -1.95
PDGFBP01127 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.85□□□□□ -1.95
PDGFBP01127 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 AF038458.1-201ENST00000588406 262 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 AC004908.2-201ENST00000609090 574 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 OR10AB1P-201ENST00000609613 938 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFBP01127 AC006927.3-201ENST00000638789 384 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFBP01127 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFBP01127 AC093010.3-201ENST00000570269 15214 ntBASIC2.85□□□□□ -1.95
PDGFBP01127 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDGFBP01127 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC006378.2-201ENST00000623178 2476 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 RNA5SP383-201ENST00000362934 120 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 SNORD56.5-201ENST00000364281 72 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 RNU6-533P-201ENST00000384144 107 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AL356057.3-201ENST00000402607 340 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.84□□□□□ -1.95
PDGFBP01127 MED14P1-201ENST00000430517 648 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC009969.1-201ENST00000438726 172 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 MTCO3P45-201ENST00000443036 613 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 GAPDHP27-201ENST00000447427 1020 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC104058.1-201ENST00000448028 297 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 RPS27AP8-201ENST00000452665 445 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFBP01127 RPS15AP36-201ENST00000492022 382 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC114786.4-201ENST00000508771 728 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC113155.1-201ENST00000511141 769 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC114797.1-201ENST00000514003 728 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC109329.2-201ENST00000519658 482 ntBASIC2.84□□□□□ -1.95
PDGFBP01127 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.84□□□□□ -1.95
PDGFBP01127 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms