Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.9□□□□□ -1.95
CLDN1O95832 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN1O95832 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN1O95832 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN1O95832 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CLDN1O95832 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC007496.3-201ENST00000624987 3443 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 MIR30E-201ENST00000362104 92 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RNU4-82P-201ENST00000362443 140 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 Y_RNA.159-201ENST00000363674 87 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RNU6-1284P-201ENST00000363701 100 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AP002088.1-201ENST00000382740 395 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RNU6-76P-201ENST00000384060 104 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RNU4-55P-201ENST00000410731 137 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 ELOCP4-201ENST00000420090 333 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC073464.1-201ENST00000429823 534 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AL451074.3-201ENST00000437709 472 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RPL26P6-201ENST00000440913 438 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 GAPDHP27-201ENST00000447427 1020 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC010401.1-201ENST00000463867 348 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC011352.1-201ENST00000512300 793 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC091826.1-201ENST00000514065 313 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 RNU6-237P-201ENST00000515985 71 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN1O95832 AP001893.2-201ENST00000526949 202 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC011979.2-201ENST00000527568 352 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.89□□□□□ -1.95
CLDN1O95832 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN1O95832 AC125611.2-201ENST00000551907 647 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN1O95832 NRBF2P5-201ENST00000603087 788 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC092954.2-201ENST00000609103 430 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC017083.3-201ENST00000609955 700 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC004696.1-201ENST00000614345 607 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AC006338.1-201ENST00000618453 749 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 CR381653.2-201ENST00000624041 768 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 AL157786.1-207ENST00000627771 695 ntBASIC2.89□□□□□ -1.95
CLDN1O95832 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLDN1O95832 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN1O95832 AL672296.1-201ENST00000427780 2158 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.88□□□□□ -1.95
CLDN1O95832 AL359693.1-201ENST00000614959 2407 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN1O95832 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 Y_RNA.22-201ENST00000362492 102 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 RNU1-39P-201ENST00000383897 165 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLDN1O95832 MTCO3P40-201ENST00000392516 676 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN1O95832 AL359634.1-202ENST00000404721 284 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 CIR1P3-201ENST00000405137 479 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 RNA5SP107-201ENST00000411358 122 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 EIF1P1-201ENST00000421436 341 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 BX679664.1-201ENST00000434429 253 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 FGF7P6-202ENST00000451282 293 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 RPL23AP67-201ENST00000465341 474 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN1O95832 RPS15AP36-201ENST00000492022 382 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AL117351.2-201ENST00000513571 157 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 FAM92A1P1-201ENST00000528023 890 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AP003034.1-201ENST00000534621 422 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.88□□□□□ -1.95
CLDN1O95832 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 AC005476.1-201ENST00000554427 397 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN1O95832 MTATP6P3-201ENST00000581686 676 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 GLUD1P4-201ENST00000590914 418 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AL136363.1-201ENST00000605349 337 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AF250324.2-201ENST00000608299 610 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AL161734.1-201ENST00000609720 557 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 SNHG22-203ENST00000617833 660 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CLDN1O95832 AL158209.2-201ENST00000619266 216 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 AL136313.1-201ENST00000624804 202 ntBASIC2.88□□□□□ -1.95
CLDN1O95832 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN1O95832 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms