Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC010631.1-201ENST00000474150 156 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC010655.3-201ENST00000478818 450 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 PPIAP15-201ENST00000479662 484 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.1□□□□□ -1.75
CNOT4O95628 AC110792.1-201ENST00000491826 472 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 UBE2CP3-201ENST00000502715 450 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 RNU1-61P-201ENST00000516107 151 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 SNORD116.3-201ENST00000517176 78 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CNOT4O95628 AP000827.1-201ENST00000527814 258 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.1□□□□□ -1.75
CNOT4O95628 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 RNF138P2-201ENST00000603490 592 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC104695.3-201ENST00000604052 296 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 AC007998.5-201ENST00000622938 237 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.1□□□□□ -1.75
CNOT4O95628 AP001148.1-201ENST00000624124 2359 ntBASIC4.1□□□□□ -1.75
CNOT4O95628 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CNOT4O95628 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CNOT4O95628 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNOT4O95628 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNOT4O95628 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CNOT4O95628 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNOT4O95628 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.09□□□□□ -1.75
CNOT4O95628 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CNOT4O95628 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CNOT4O95628 RNA5SP295-201ENST00000362655 121 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 RNU6-238P-201ENST00000363313 106 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 RNU6-99P-201ENST00000364721 107 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 RNU6-95P-201ENST00000384697 107 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 MIR129-1-201ENST00000384972 72 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 Y_RNA.645-201ENST00000391229 102 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CNOT4O95628 AC080125.1-201ENST00000414888 684 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AL669831.1-202ENST00000428504 417 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.09□□□□□ -1.75
CNOT4O95628 NUTF2P7-201ENST00000453086 375 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AL445433.1-201ENST00000457507 257 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AC108751.2-201ENST00000469993 231 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.09□□□□□ -1.75
CNOT4O95628 RN7SKP21-201ENST00000516503 220 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 Y_RNA.721-201ENST00000517207 102 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AC087854.1-201ENST00000519706 414 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 CYCSP27-201ENST00000527643 293 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 AC026371.1-201ENST00000551867 419 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 RPL23AP87-202ENST00000573039 466 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.09□□□□□ -1.75
CNOT4O95628 AC018889.1-201ENST00000605372 397 ntBASIC4.09□□□□□ -1.75
CNOT4O95628 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CNOT4O95628 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CNOT4O95628 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CNOT4O95628 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.76
CNOT4O95628 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CNOT4O95628 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNOT4O95628 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CNOT4O95628 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CNOT4O95628 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CNOT4O95628 SNORD62.1-201ENST00000362541 86 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 RNA5SP28-201ENST00000363841 119 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 Y_RNA.389-201ENST00000383924 113 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 RNU6-190P-201ENST00000384154 102 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CNOT4O95628 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CNOT4O95628 ELOCP19-201ENST00000411919 318 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 Z99755.1-201ENST00000414048 380 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 RPS23P10-201ENST00000416185 486 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.08□□□□□ -1.76
CNOT4O95628 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 SNORD5.1-201ENST00000458800 75 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 AC087884.1-201ENST00000469738 328 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 RPS23P3-201ENST00000470993 430 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 AC022493.2-201ENST00000506122 481 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 SCARNA16.2-201ENST00000516520 172 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.08□□□□□ -1.76
CNOT4O95628 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.08□□□□□ -1.76
CNOT4O95628 AP002826.1-201ENST00000608835 315 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CNOT4O95628 AL359547.2-201ENST00000615810 418 ntBASIC4.08□□□□□ -1.76
CNOT4O95628 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.08□□□□□ -1.76
CNOT4O95628 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.07□□□□□ -1.76
CNOT4O95628 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNOT4O95628 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
CNOT4O95628 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.07□□□□□ -1.76
CNOT4O95628 RNU6-379P-201ENST00000363813 104 ntBASIC4.07□□□□□ -1.76
CNOT4O95628 RNU6-306P-201ENST00000384617 107 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms