Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC006927.2-201ENST00000639256 389 ntBASIC2.29□□□□□ -2.04
NPHP4O75161 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NPHP4O75161 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPHP4O75161 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
NPHP4O75161 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPHP4O75161 SNRPEP3-201ENST00000338402 276 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 MIR96-201ENST00000362288 78 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RNU4-51P-201ENST00000364206 140 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RNU2-43P-201ENST00000410306 190 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RNU2-42P-201ENST00000410697 113 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
NPHP4O75161 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.28□□□□□ -2.04
NPHP4O75161 AL356320.2-201ENST00000417263 507 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 BEND7P1-201ENST00000422058 457 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC019178.2-201ENST00000423595 505 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.28□□□□□ -2.04
NPHP4O75161 MTND2P5-201ENST00000432656 1006 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RPL26P6-201ENST00000440913 438 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AL592447.1-201ENST00000447592 540 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC079776.3-201ENST00000450665 370 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AMD1P1-201ENST00000457220 922 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP4O75161 AC026414.1-201ENST00000504046 698 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP4O75161 AC114322.1-201ENST00000506771 926 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPHP4O75161 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RNU6-1261P-201ENST00000517194 104 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC125611.2-201ENST00000551907 647 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP4O75161 AC011260.1-201ENST00000578420 472 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.28□□□□□ -2.04
NPHP4O75161 AC099785.1-201ENST00000605697 437 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.28□□□□□ -2.04
NPHP4O75161 AL138880.2-201ENST00000616214 239 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AC010975.3-201ENST00000618727 978 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 AL157770.1-201ENST00000623049 439 ntBASIC2.28□□□□□ -2.04
NPHP4O75161 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NPHP4O75161 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NPHP4O75161 HSPE1P11-201ENST00000339579 310 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 SNORA63.3-201ENST00000362682 132 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 Y_RNA.354-201ENST00000365448 111 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NPHP4O75161 SNORA67.6-201ENST00000391093 99 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 RPS3AP24-201ENST00000407896 734 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 RPL17P12-201ENST00000413391 526 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NPHP4O75161 BX682237.1-201ENST00000415016 335 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 DPRXP1-201ENST00000426312 460 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP4O75161 snoU13.28-201ENST00000459235 104 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AL049714.1-201ENST00000466686 347 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AC090096.1-201ENST00000489168 390 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 TMEM251P1-201ENST00000503717 318 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP4O75161 RNU6-928P-201ENST00000516876 104 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AC104417.1-201ENST00000523974 751 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP4O75161 AP003066.2-201ENST00000529375 555 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.27□□□□□ -2.05
NPHP4O75161 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.27□□□□□ -2.05
NPHP4O75161 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP4O75161 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.27□□□□□ -2.05
NPHP4O75161 VN1R87P-201ENST00000596706 487 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AC008739.2-201ENST00000597006 317 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 AC079597.1-201ENST00000624306 508 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.27□□□□□ -2.05
NPHP4O75161 AC110079.1-202ENST00000635213 138 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 MKKS-204ENST00000639674 192 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 PABPC1P9-201ENST00000426076 1612 ntBASIC2.27□□□□□ -2.05
NPHP4O75161 Y_RNA.25-201ENST00000362528 102 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 Y_RNA.548-201ENST00000384656 105 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 MIR325-201ENST00000385260 98 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 DHFRP6-201ENST00000401776 268 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 RPL7P27-201ENST00000403775 720 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AC019070.1-201ENST00000415008 1024 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 RPL27AP8-201ENST00000424277 446 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.26□□□□□ -2.05
NPHP4O75161 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.26□□□□□ -2.05
NPHP4O75161 AC092427.1-201ENST00000439177 601 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.26□□□□□ -2.05
NPHP4O75161 OFD1P3Y-201ENST00000453312 783 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.26□□□□□ -2.05
NPHP4O75161 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.26□□□□□ -2.05
NPHP4O75161 SETP11-201ENST00000473027 690 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NPHP4O75161 KLRA1P-201ENST00000503499 986 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AC087373.1-201ENST00000524920 491 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.26□□□□□ -2.05
NPHP4O75161 AC125611.1-201ENST00000549563 229 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.26□□□□□ -2.05
NPHP4O75161 MIR3609-201ENST00000582661 80 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AC105224.1-201ENST00000587055 421 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.26□□□□□ -2.05
NPHP4O75161 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.26□□□□□ -2.05
NPHP4O75161 DUXAP11-201ENST00000603858 526 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 APOOP1-201ENST00000604695 592 ntBASIC2.26□□□□□ -2.05
NPHP4O75161 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.26□□□□□ -2.05
NPHP4O75161 ZNF209P-201ENST00000593450 2304 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms