Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.24□□□□□ -2.05
BRD4O60885 RPL7P55-201ENST00000450522 746 ntBASIC2.24□□□□□ -2.05
BRD4O60885 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.24□□□□□ -2.05
BRD4O60885 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.24□□□□□ -2.05
BRD4O60885 AC034222.1-201ENST00000494052 532 ntBASIC2.24□□□□□ -2.05
BRD4O60885 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.24□□□□□ -2.05
BRD4O60885 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.24□□□□□ -2.05
BRD4O60885 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.24□□□□□ -2.05
BRD4O60885 MIR5571-201ENST00000577998 113 ntBASIC2.24□□□□□ -2.05
BRD4O60885 AC093838.1-201ENST00000613014 469 ntBASIC2.24□□□□□ -2.05
BRD4O60885 OR5H6-203ENST00000642105 978 ntBASIC2.24□□□□□ -2.05
BRD4O60885 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
BRD4O60885 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
BRD4O60885 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
BRD4O60885 SNORD56.4-201ENST00000363883 71 ntBASIC2.23□□□□□ -2.05
BRD4O60885 SNORD51-201ENST00000384320 80 ntBASIC2.23□□□□□ -2.05
BRD4O60885 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.23□□□□□ -2.05
BRD4O60885 FO393414.1-201ENST00000428697 1184 ntBASIC2.23□□□□□ -2.05
BRD4O60885 RPL17P35-201ENST00000432217 549 ntBASIC2.23□□□□□ -2.05
BRD4O60885 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 AC107626.1-201ENST00000471084 183 ntBASIC2.23□□□□□ -2.05
BRD4O60885 RPL21P47-201ENST00000483696 477 ntBASIC2.23□□□□□ -2.05
BRD4O60885 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 MRPS17P9-201ENST00000511924 393 ntBASIC2.23□□□□□ -2.05
BRD4O60885 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.23□□□□□ -2.05
BRD4O60885 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.23□□□□□ -2.05
BRD4O60885 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 MTCO1P40-201ENST00000574371 625 ntBASIC2.23□□□□□ -2.05
BRD4O60885 OR4K8P-201ENST00000578842 1048 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC012493.3-201ENST00000604494 112 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC012360.2-201ENST00000609349 391 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AL627230.6-201ENST00000611129 280 ntBASIC2.23□□□□□ -2.05
BRD4O60885 RNU6-792P-201ENST00000363490 107 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AL121978.1-201ENST00000402778 359 ntBASIC2.23□□□□□ -2.05
BRD4O60885 CIR1P3-201ENST00000405137 479 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AL355615.1-201ENST00000406187 641 ntBASIC2.23□□□□□ -2.05
BRD4O60885 RNU4-27P-201ENST00000410889 139 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 GTF2IP20-201ENST00000431663 360 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC016691.1-201ENST00000441321 413 ntBASIC2.23□□□□□ -2.05
BRD4O60885 RAC1P7-201ENST00000445367 377 ntBASIC2.23□□□□□ -2.05
BRD4O60885 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
BRD4O60885 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 AMD1P1-201ENST00000457220 922 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC147055.4-201ENST00000504399 745 ntBASIC2.23□□□□□ -2.05
BRD4O60885 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 AC027338.1-201ENST00000514840 825 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.23□□□□□ -2.05
BRD4O60885 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.23□□□□□ -2.05
BRD4O60885 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.23□□□□□ -2.05
BRD4O60885 AC068135.2-201ENST00000569293 1028 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AL354943.1-201ENST00000572103 781 ntBASIC2.23□□□□□ -2.05
BRD4O60885 SNORD39.3-201ENST00000584451 71 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AC007229.1-201ENST00000590455 412 ntBASIC2.23□□□□□ -2.05
BRD4O60885 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.22□□□□□ -2.05
BRD4O60885 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
BRD4O60885 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.22□□□□□ -2.05
BRD4O60885 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
BRD4O60885 Y_RNA.191-201ENST00000363972 113 ntBASIC2.22□□□□□ -2.05
BRD4O60885 AL158050.1-201ENST00000416077 457 ntBASIC2.22□□□□□ -2.05
BRD4O60885 AIMP1P2-201ENST00000425294 312 ntBASIC2.22□□□□□ -2.05
BRD4O60885 MTCO3P2-201ENST00000457365 171 ntBASIC2.22□□□□□ -2.05
BRD4O60885 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 AC112518.2-201ENST00000508565 425 ntBASIC2.22□□□□□ -2.05
BRD4O60885 RNU7-193P-201ENST00000516723 65 ntBASIC2.22□□□□□ -2.05
BRD4O60885 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.22□□□□□ -2.05
BRD4O60885 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
BRD4O60885 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 MTCYBP27-201ENST00000555160 670 ntBASIC2.22□□□□□ -2.05
BRD4O60885 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.22□□□□□ -2.05
BRD4O60885 BNIP3P4-201ENST00000604946 565 ntBASIC2.22□□□□□ -2.05
BRD4O60885 AL356585.4-201ENST00000623078 1229 ntBASIC2.22□□□□□ -2.05
BRD4O60885 AC097460.3-201ENST00000623099 442 ntBASIC2.22□□□□□ -2.05
BRD4O60885 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
BRD4O60885 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
BRD4O60885 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
BRD4O60885 AC233981.2-201ENST00000611524 1614 ntBASIC2.21□□□□□ -2.06
BRD4O60885 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRD4O60885 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
BRD4O60885 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRD4O60885 PTGES3P2-201ENST00000407942 482 ntBASIC2.21□□□□□ -2.06
BRD4O60885 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.21□□□□□ -2.06
BRD4O60885 RNU6-77P-201ENST00000410554 91 ntBASIC2.21□□□□□ -2.06
BRD4O60885 AL445183.3-201ENST00000414168 502 ntBASIC2.21□□□□□ -2.06
BRD4O60885 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.21□□□□□ -2.06
BRD4O60885 USP9YP10-201ENST00000454868 628 ntBASIC2.21□□□□□ -2.06
BRD4O60885 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.21□□□□□ -2.06
BRD4O60885 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.21□□□□□ -2.06
BRD4O60885 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.21□□□□□ -2.06
BRD4O60885 RNU5A-7P-201ENST00000515979 116 ntBASIC2.21□□□□□ -2.06
BRD4O60885 Y_RNA.670-201ENST00000516255 105 ntBASIC2.21□□□□□ -2.06
BRD4O60885 RNA5SP480-201ENST00000516840 109 ntBASIC2.21□□□□□ -2.06
BRD4O60885 SNORA48.10-201ENST00000516965 160 ntBASIC2.21□□□□□ -2.06
BRD4O60885 AC124293.1-201ENST00000530034 493 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms