Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNND1O60716 FDX1P2-201ENST00000450769 375 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNND1O60716 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNND1O60716 RNU7-63P-201ENST00000459054 62 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNND1O60716 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNND1O60716 Y_RNA.704-201ENST00000516851 102 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 RNU6-677P-201ENST00000516914 101 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNND1O60716 ATP5F1P5-201ENST00000526403 760 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNND1O60716 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.04□□□□□ -1.76
CTNND1O60716 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.04□□□□□ -1.76
CTNND1O60716 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNND1O60716 AC093788.1-201ENST00000609356 927 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 AC068944.2-201ENST00000610373 403 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.04□□□□□ -1.76
CTNND1O60716 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNND1O60716 API5P2-201ENST00000397055 1498 ntBASIC4.04□□□□□ -1.76
CTNND1O60716 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTNND1O60716 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
CTNND1O60716 Y_RNA.381-201ENST00000365666 102 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTNND1O60716 RNU6-387P-201ENST00000411331 105 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTNND1O60716 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTNND1O60716 Z85995.1-201ENST00000415547 335 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 USP9YP27-201ENST00000418455 438 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 MTCYBP5-201ENST00000423752 1135 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.03□□□□□ -1.76
CTNND1O60716 MTND4P25-201ENST00000441039 533 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNND1O60716 Z75741.1-201ENST00000446793 314 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.03□□□□□ -1.76
CTNND1O60716 FGF7P6-202ENST00000451282 293 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 SNORA59A-201ENST00000459326 152 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 SNRPGP3-201ENST00000469405 227 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNND1O60716 RN7SL504P-201ENST00000494496 287 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNND1O60716 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.03□□□□□ -1.76
CTNND1O60716 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.03□□□□□ -1.76
CTNND1O60716 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNND1O60716 MIR5004-201ENST00000579078 107 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.03□□□□□ -1.76
CTNND1O60716 MIR4276-201ENST00000584832 70 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AP001486.3-201ENST00000615334 372 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 AL354950.2-201ENST00000617939 290 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 uc_338.11-201ENST00000619132 160 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 MIR3688-2-201ENST00000636963 87 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 MTND5P42-201ENST00000637720 498 ntBASIC4.03□□□□□ -1.76
CTNND1O60716 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTNND1O60716 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTNND1O60716 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.03□□□□□ -1.76
CTNND1O60716 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTNND1O60716 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTNND1O60716 SNORD115-7-201ENST00000365306 82 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 Y_RNA.453-201ENST00000384223 109 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AL591416.1-201ENST00000404015 867 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AL139397.2-201ENST00000404529 772 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 RPL30P2-201ENST00000414021 291 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 AL109913.1-201ENST00000421173 514 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNND1O60716 MTCO1P20-201ENST00000425366 358 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 ELOCP14-201ENST00000428070 331 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC006028.1-201ENST00000438379 402 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 ELOCP7-201ENST00000439968 331 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 FABP5P13-201ENST00000452144 328 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 RNU6-420P-201ENST00000458780 107 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 RNU6-261P-201ENST00000459506 102 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC078785.3-201ENST00000476607 425 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 RNU6-1281P-201ENST00000516223 105 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 SNORA40.12-201ENST00000516329 111 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC109635.3-201ENST00000529536 185 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.02□□□□□ -1.77
CTNND1O60716 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC008752.3-201ENST00000588113 712 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 AC007014.2-201ENST00000615581 479 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
CTNND1O60716 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.02□□□□□ -1.77
CTNND1O60716 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.02□□□□□ -1.77
CTNND1O60716 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTNND1O60716 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.01□□□□□ -1.77
CTNND1O60716 RNU6-288P-201ENST00000363690 104 ntBASIC4.01□□□□□ -1.77
CTNND1O60716 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTNND1O60716 Y_RNA.573-201ENST00000384763 105 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms