Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 TTC39CP1-201ENST00000512513 755 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 RNU6-237P-201ENST00000515985 71 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 RNU6-1282P-201ENST00000516735 96 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 RNU6-430P-201ENST00000517078 107 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AP000907.2-201ENST00000530827 353 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AP002404.1-201ENST00000532005 451 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 HMGB1P6-201ENST00000569046 646 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AF038458.1-201ENST00000588406 262 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AL451007.1-201ENST00000595491 289 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AL161729.4-201ENST00000604650 476 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC121334.2-201ENST00000605387 271 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AL021997.1-201ENST00000605757 193 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC093838.1-201ENST00000613014 469 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 TUG1_2.1-201ENST00000614234 87 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC013476.2-201ENST00000614456 459 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 uc_338.12-201ENST00000616344 181 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC072046.2-201ENST00000618366 268 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC099842.1-201ENST00000619919 596 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC136475.10-201ENST00000620253 385 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC112204.3-201ENST00000623822 332 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 AC091564.4-201ENST00000533934 2194 ntBASIC3.26□□□□□ -1.89
SYNCRIPO60506 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
SYNCRIPO60506 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SYNCRIPO60506 MTND5P27-201ENST00000428871 1720 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 Y_RNA.3-201ENST00000362331 103 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 Y_RNA.41-201ENST00000362646 102 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RNU5A-8P-201ENST00000364102 114 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RNU1-140P-201ENST00000365040 165 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RNU1-39P-201ENST00000383897 165 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RNU6-259P-201ENST00000383999 107 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RPL23AP32-201ENST00000395315 459 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 RNU2-8P-201ENST00000410727 190 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 COTL1P1-201ENST00000422309 375 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AL512844.2-201ENST00000433990 593 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 TIMM9P1-201ENST00000436122 256 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 CST9LP2-201ENST00000437612 320 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 RPS15AP36-201ENST00000492022 382 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AP003392.2-201ENST00000527269 208 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AP003072.2-201ENST00000527756 676 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC137800.2-201ENST00000574375 120 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 MIR3913-1-201ENST00000577744 102 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC073648.5-201ENST00000603502 305 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC004492.1-201ENST00000607036 742 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AC004908.2-201ENST00000609090 574 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AL161629.2-201ENST00000615347 275 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNCRIPO60506 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SYNCRIPO60506 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 MTND5P26-201ENST00000426018 1752 ntBASIC3.25□□□□□ -1.89
SYNCRIPO60506 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.25□□□□□ -1.89
SYNCRIPO60506 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SYNCRIPO60506 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNCRIPO60506 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNCRIPO60506 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 RNU5A-6P-201ENST00000384136 116 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 AL139095.1-201ENST00000404326 391 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 RPL23AP69-201ENST00000431134 458 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNCRIPO60506 ELOCP30-201ENST00000447108 299 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SYNCRIPO60506 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 EIF4BP1-201ENST00000554881 351 ntBASIC3.24□□□□□ -1.89
SYNCRIPO60506 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNCRIPO60506 AC098614.4-201ENST00000607601 462 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms