Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 BBIP1P1-201ENST00000602999 279 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 XIAPP1-201ENST00000603162 600 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 7SK.7-201ENST00000603504 247 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AP001330.4-201ENST00000604350 154 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.2□□□□□ -1.74
FOXN1O15353 AL442067.1-201ENST00000613261 223 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC009318.4-201ENST00000620496 486 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC079597.1-201ENST00000624306 508 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.2□□□□□ -1.74
FOXN1O15353 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXN1O15353 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
FOXN1O15353 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN1O15353 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXN1O15353 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXN1O15353 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXN1O15353 RNY1P12-201ENST00000364251 105 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RNU6-853P-201ENST00000364306 107 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 Y_RNA.395-201ENST00000383945 109 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 Y_RNA.401-201ENST00000383965 117 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RNU6-308P-201ENST00000390957 107 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RNU4-14P-201ENST00000410858 122 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC009310.1-201ENST00000414414 451 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXN1O15353 HSPE1P1-201ENST00000421494 318 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 PMCHL1-202ENST00000423102 261 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC006548.1-201ENST00000427470 102 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RPS3AP52-201ENST00000435639 297 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXN1O15353 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXN1O15353 RNU6-1208P-201ENST00000459588 107 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RPS20P22-201ENST00000473700 357 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.19□□□□□ -1.74
FOXN1O15353 AP001025.2-201ENST00000490908 477 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 VWA8P1-201ENST00000510889 176 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 Y_RNA.676-201ENST00000516393 96 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RNU6-794P-201ENST00000517261 64 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.19□□□□□ -1.74
FOXN1O15353 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 AC098848.2-201ENST00000588023 330 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXN1O15353 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.19□□□□□ -1.74
FOXN1O15353 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXN1O15353 DPPA3P3-201ENST00000603842 430 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 RNU6-89P-201ENST00000606519 100 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 AC091925.1-201ENST00000623204 462 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 CR381572.1-201ENST00000625098 102 ntBASIC4.19□□□□□ -1.74
FOXN1O15353 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXN1O15353 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXN1O15353 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXN1O15353 AC090971.4-201ENST00000560291 1800 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN1O15353 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
FOXN1O15353 MTND4P14-201ENST00000435799 1354 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
FOXN1O15353 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 RN7SKP44-201ENST00000363602 316 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RNY4P16-201ENST00000364768 94 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RNU1-140P-201ENST00000365040 165 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 PRELID3BP11-201ENST00000414230 479 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RPS26P40-201ENST00000435209 294 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC010095.1-201ENST00000443543 144 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN1O15353 AC073415.1-201ENST00000449240 153 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RPL23AP15-201ENST00000450202 459 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AL356010.1-201ENST00000456364 102 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC006512.1-201ENST00000468816 291 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 VN1R17P-201ENST00000472048 1090 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC006445.1-201ENST00000491925 405 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC034222.1-201ENST00000494052 532 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN1O15353 SCARNA24.1-201ENST00000516465 137 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RN7SKP209-201ENST00000516888 304 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 RNU6-1137P-201ENST00000517073 99 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXN1O15353 AL163153.1-201ENST00000554223 283 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 OR4T1P-201ENST00000554933 911 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXN1O15353 MIR3149-201ENST00000584629 83 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN1O15353 AP001029.3-201ENST00000588063 596 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC073657.2-201ENST00000605661 303 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC093732.2-201ENST00000607950 274 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 uc_338.15-201ENST00000615470 191 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 AC087588.2-201ENST00000617667 426 ntBASIC4.18□□□□□ -1.74
FOXN1O15353 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
FOXN1O15353 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXN1O15353 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms