Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC090774.1-201ENST00000435925 246 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 RNA5SP269-201ENST00000459032 137 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX4O14627 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX4O14627 AF131216.2-201ENST00000512316 564 ntBASIC2.63□□□□□ -1.99
CDX4O14627 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC025881.1-201ENST00000518851 512 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX4O14627 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 MTCYBP20-201ENST00000524239 1129 ntBASIC2.63□□□□□ -1.99
CDX4O14627 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX4O14627 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX4O14627 HPRT1P3-201ENST00000539521 576 ntBASIC2.63□□□□□ -1.99
CDX4O14627 OR4T1P-201ENST00000554933 911 ntBASIC2.63□□□□□ -1.99
CDX4O14627 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 AC091489.2-201ENST00000566263 604 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 MTND1P15-201ENST00000579262 949 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC060771.1-201ENST00000582031 164 ntBASIC2.63□□□□□ -1.99
CDX4O14627 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX4O14627 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX4O14627 DEFB131E-202ENST00000602581 683 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AL133393.1-201ENST00000603277 287 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC106900.2-201ENST00000604994 317 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC005332.10-201ENST00000612725 619 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX4O14627 AC002076.2-201ENST00000617362 122 ntBASIC2.63□□□□□ -1.99
CDX4O14627 AC006111.3-201ENST00000622137 383 ntBASIC2.63□□□□□ -1.99
CDX4O14627 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX4O14627 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CDX4O14627 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX4O14627 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX4O14627 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDX4O14627 AC092125.1-201ENST00000562568 1995 ntBASIC2.62□□□□□ -1.99
CDX4O14627 FGF7P2-201ENST00000332473 296 ntBASIC2.62□□□□□ -1.99
CDX4O14627 RNU5A-1-201ENST00000362698 116 ntBASIC2.62□□□□□ -1.99
CDX4O14627 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX4O14627 RNU6-1119P-201ENST00000384349 108 ntBASIC2.62□□□□□ -1.99
CDX4O14627 RNU6-754P-201ENST00000391166 107 ntBASIC2.62□□□□□ -1.99
CDX4O14627 RNU6-1077P-201ENST00000410506 102 ntBASIC2.62□□□□□ -1.99
CDX4O14627 Y_RNA.619-201ENST00000410951 90 ntBASIC2.62□□□□□ -1.99
CDX4O14627 RPS7P13-201ENST00000413955 498 ntBASIC2.62□□□□□ -1.99
CDX4O14627 HSPE1P1-201ENST00000421494 318 ntBASIC2.62□□□□□ -1.99
CDX4O14627 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX4O14627 RPL7L1P10-201ENST00000427790 463 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AL356867.1-201ENST00000429623 299 ntBASIC2.62□□□□□ -1.99
CDX4O14627 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX4O14627 MTND1P27-201ENST00000451117 902 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX4O14627 TPT1P7-201ENST00000458300 517 ntBASIC2.62□□□□□ -1.99
CDX4O14627 RNA5SP310-201ENST00000459084 116 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AP000797.1-201ENST00000478870 387 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 SNORD59.2-201ENST00000516873 68 ntBASIC2.62□□□□□ -1.99
CDX4O14627 IGKV3-31-201ENST00000523109 329 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AP002748.2-201ENST00000528671 348 ntBASIC2.62□□□□□ -1.99
CDX4O14627 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC125611.2-201ENST00000551907 647 ntBASIC2.62□□□□□ -1.99
CDX4O14627 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 AC015712.3-201ENST00000559380 164 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX4O14627 RPL23AP84-201ENST00000571193 464 ntBASIC2.62□□□□□ -1.99
CDX4O14627 MIR4307-201ENST00000582802 84 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC105224.1-201ENST00000587055 421 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC068790.3-201ENST00000602988 553 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AP000403.1-201ENST00000603349 851 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC080078.2-201ENST00000603766 501 ntBASIC2.62□□□□□ -1.99
CDX4O14627 BCRP9-201ENST00000605312 388 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC004067.1-201ENST00000608733 700 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC004908.2-201ENST00000609090 574 ntBASIC2.62□□□□□ -1.99
CDX4O14627 AC068792.1-201ENST00000621354 417 ntBASIC2.62□□□□□ -1.99
CDX4O14627 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CDX4O14627 AL355596.1-201ENST00000565399 3996 ntBASIC2.62□□□□□ -1.99
CDX4O14627 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX4O14627 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDX4O14627 RNU1-35P-201ENST00000362782 153 ntBASIC2.61□□□□□ -1.99
CDX4O14627 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
CDX4O14627 U8.14-201ENST00000390843 143 ntBASIC2.61□□□□□ -1.99
CDX4O14627 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.61□□□□□ -1.99
CDX4O14627 RNU4-53P-201ENST00000410828 140 ntBASIC2.61□□□□□ -1.99
CDX4O14627 RNA5SP107-201ENST00000411358 122 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 PPP1R11P2-201ENST00000423543 382 ntBASIC2.61□□□□□ -1.99
CDX4O14627 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.61□□□□□ -1.99
CDX4O14627 AL445669.1-201ENST00000426743 755 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.61□□□□□ -1.99
CDX4O14627 AL590383.1-201ENST00000428602 75 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC109583.1-201ENST00000432156 268 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AC112220.1-201ENST00000434628 355 ntBASIC2.61□□□□□ -1.99
CDX4O14627 AL513043.1-201ENST00000439124 535 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms