Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC118469.1-201ENST00000442943 488 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGN4O00479 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGN4O00479 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGN4O00479 COX6CP18-201ENST00000448769 222 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGN4O00479 RPL12P25-201ENST00000455592 494 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 RPS20P24-201ENST00000457473 361 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 CKS1BP2-201ENST00000497342 240 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGN4O00479 AC114786.4-201ENST00000508771 728 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 TPT1P8-201ENST00000510120 555 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 AC114797.1-201ENST00000514003 728 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.95□□□□□ -2.26
HMGN4O00479 AC087465.1-201ENST00000560574 245 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 AC008121.1-201ENST00000603244 268 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGN4O00479 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGN4O00479 LINC02211-204ENST00000642024 1070 ntBASIC0.95□□□□□ -2.26
HMGN4O00479 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HMGN4O00479 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
HMGN4O00479 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGN4O00479 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMGN4O00479 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMGN4O00479 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
HMGN4O00479 RNU1-72P-201ENST00000362976 153 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 RNU6-441P-201ENST00000384545 106 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 SNORA8-201ENST00000384574 139 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 MIR218-1-201ENST00000384999 110 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGN4O00479 SNRPEP10-201ENST00000420249 274 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGN4O00479 AL512844.2-201ENST00000433990 593 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC104058.1-201ENST00000448028 297 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGN4O00479 AC104073.1-201ENST00000451988 151 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGN4O00479 snoU109.4-201ENST00000458953 143 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGN4O00479 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGN4O00479 MRPS33P3-201ENST00000513456 322 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.94□□□□□ -2.26
HMGN4O00479 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.94□□□□□ -2.26
HMGN4O00479 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGN4O00479 MIR3126-201ENST00000577443 74 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AP001542.2-201ENST00000593141 364 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGN4O00479 BNIP3P4-201ENST00000604946 565 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC097504.2-201ENST00000608088 454 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 AC117490.2-201ENST00000610042 594 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 MIR6715A-201ENST00000615929 79 ntBASIC0.94□□□□□ -2.26
HMGN4O00479 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HMGN4O00479 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGN4O00479 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AL356131.1-201ENST00000405826 414 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC023141.4-201ENST00000412031 328 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 UBE2V1P9-201ENST00000414760 368 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 SDAD1P3-201ENST00000427380 333 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC012497.1-201ENST00000429392 575 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 TAAR7P-201ENST00000436141 242 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGN4O00479 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 PABPC1P3-201ENST00000469174 459 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 RNU6-202P-201ENST00000515998 96 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 RNA5SP137-201ENST00000516833 135 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGN4O00479 EEF1B2P4-201ENST00000551398 348 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC103810.8-201ENST00000607347 118 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 AL592148.2-201ENST00000612210 372 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGN4O00479 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
HMGN4O00479 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
HMGN4O00479 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
HMGN4O00479 AL161722.3-201ENST00000605789 2983 ntBASIC0.93□□□□□ -2.26
HMGN4O00479 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
HMGN4O00479 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGN4O00479 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HMGN4O00479 AL161781.1-201ENST00000354277 403 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 U3.13-201ENST00000364804 214 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HMGN4O00479 RPL21P90-201ENST00000415692 466 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 UBE2FP1-201ENST00000416536 447 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC244453.4-201ENST00000419150 388 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC246680.2-201ENST00000422106 389 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGN4O00479 AC244035.1-201ENST00000430042 390 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 BMI1P1-201ENST00000445879 941 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AL096803.2-201ENST00000450032 677 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 VPS26AP1-201ENST00000483197 979 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms