Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
DFFAO00273 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC011477.1-204ENST00000623416 1325 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AL390862.1-201ENST00000635467 1469 ntBASIC2.07□□□□□ -2.08
DFFAO00273 AC092447.10-201ENST00000620607 1652 ntBASIC2.06□□□□□ -2.08
DFFAO00273 RNU6-220P-201ENST00000390919 107 ntBASIC2.06□□□□□ -2.08
DFFAO00273 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.06□□□□□ -2.08
DFFAO00273 CCNG1P1-201ENST00000406783 885 ntBASIC2.06□□□□□ -2.08
DFFAO00273 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.06□□□□□ -2.08
DFFAO00273 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
DFFAO00273 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.06□□□□□ -2.08
DFFAO00273 AC096649.2-201ENST00000416186 393 ntBASIC2.06□□□□□ -2.08
DFFAO00273 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.06□□□□□ -2.08
DFFAO00273 USP12PX-201ENST00000432383 1057 ntBASIC2.06□□□□□ -2.08
DFFAO00273 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.06□□□□□ -2.08
DFFAO00273 RPL23AP76-201ENST00000441860 458 ntBASIC2.06□□□□□ -2.08
DFFAO00273 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.06□□□□□ -2.08
DFFAO00273 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.06□□□□□ -2.08
DFFAO00273 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.06□□□□□ -2.08
DFFAO00273 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
DFFAO00273 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.06□□□□□ -2.08
DFFAO00273 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.06□□□□□ -2.08
DFFAO00273 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.06□□□□□ -2.08
DFFAO00273 AC104563.1-201ENST00000476147 376 ntBASIC2.06□□□□□ -2.08
DFFAO00273 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.06□□□□□ -2.08
DFFAO00273 AC016550.1-201ENST00000505348 785 ntBASIC2.06□□□□□ -2.08
DFFAO00273 HMGN1P28-201ENST00000521340 364 ntBASIC2.06□□□□□ -2.08
DFFAO00273 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.06□□□□□ -2.08
DFFAO00273 RPS3AP23-202ENST00000574601 686 ntBASIC2.06□□□□□ -2.08
DFFAO00273 AC004987.4-201ENST00000603383 338 ntBASIC2.06□□□□□ -2.08
DFFAO00273 AC104763.3-201ENST00000613765 618 ntBASIC2.06□□□□□ -2.08
DFFAO00273 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
DFFAO00273 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DFFAO00273 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
DFFAO00273 SNORA3A-201ENST00000364113 130 ntBASIC2.05□□□□□ -2.08
DFFAO00273 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
DFFAO00273 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.05□□□□□ -2.08
DFFAO00273 USP9YP13-201ENST00000417797 480 ntBASIC2.05□□□□□ -2.08
DFFAO00273 BPY2DP-201ENST00000422208 265 ntBASIC2.05□□□□□ -2.08
DFFAO00273 HMGB1P9-201ENST00000429856 646 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AL445646.1-201ENST00000431784 216 ntBASIC2.05□□□□□ -2.08
DFFAO00273 IPO7P1-201ENST00000442031 636 ntBASIC2.05□□□□□ -2.08
DFFAO00273 MTCO2P25-201ENST00000447065 681 ntBASIC2.05□□□□□ -2.08
DFFAO00273 HMGB1P36-201ENST00000487709 576 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AL160314.1-201ENST00000490836 438 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC106872.3-201ENST00000495104 446 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.05□□□□□ -2.08
DFFAO00273 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.05□□□□□ -2.08
DFFAO00273 AC008837.2-201ENST00000513076 418 ntBASIC2.05□□□□□ -2.08
DFFAO00273 RNU6-467P-201ENST00000517027 110 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.05□□□□□ -2.08
DFFAO00273 AC135628.1-201ENST00000568867 534 ntBASIC2.05□□□□□ -2.08
DFFAO00273 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.05□□□□□ -2.08
DFFAO00273 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.05□□□□□ -2.08
DFFAO00273 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
DFFAO00273 SNORD14A-201ENST00000606526 91 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC239868.4-201ENST00000608318 671 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AL589743.7-201ENST00000612637 233 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC110994.2-201ENST00000635481 492 ntBASIC2.05□□□□□ -2.08
DFFAO00273 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.05□□□□□ -2.08
DFFAO00273 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
DFFAO00273 MTND4P27-201ENST00000450813 1354 ntBASIC2.05□□□□□ -2.08
DFFAO00273 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
DFFAO00273 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.04□□□□□ -2.08
DFFAO00273 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU6-1083P-201ENST00000384022 107 ntBASIC2.04□□□□□ -2.08
DFFAO00273 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU6-432P-201ENST00000384196 109 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU6-298P-201ENST00000390888 96 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AL355497.1-201ENST00000406262 551 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.04□□□□□ -2.08
DFFAO00273 MED14P1-201ENST00000430517 648 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.04□□□□□ -2.08
DFFAO00273 RPL35AP22-201ENST00000436855 335 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.04□□□□□ -2.08
DFFAO00273 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 RPS27AP10-201ENST00000496103 208 ntBASIC2.04□□□□□ -2.08
DFFAO00273 RPL38P4-201ENST00000502376 214 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.04□□□□□ -2.08
DFFAO00273 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 AC021451.1-201ENST00000523498 1129 ntBASIC2.04□□□□□ -2.08
DFFAO00273 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.04□□□□□ -2.08
DFFAO00273 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
DFFAO00273 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.04□□□□□ -2.08
DFFAO00273 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.04□□□□□ -2.08
DFFAO00273 MIR5089-201ENST00000580047 84 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.04□□□□□ -2.08
DFFAO00273 AP000403.1-201ENST00000603349 851 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.04□□□□□ -2.08
DFFAO00273 AC004520.1-201ENST00000608362 1413 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.15-201ENST00000611544 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 AC005332.10-201ENST00000612725 619 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.16-201ENST00000613119 191 ntBASIC2.04□□□□□ -2.08
DFFAO00273 U2.12-201ENST00000613778 191 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms