Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AL137159.1-201ENST00000452808 512 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 CYP2C59P-201ENST00000457790 269 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 RPL39P28-201ENST00000465655 155 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC106872.3-201ENST00000495104 446 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC093677.1-201ENST00000514414 678 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA31.22-201ENST00000517204 135 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 CR383656.7-201ENST00000548164 174 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC110588.1-201ENST00000559699 137 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 MTCO3P22-201ENST00000603219 784 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC068313.1-201ENST00000604028 1008 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AC018618.2-201ENST00000604770 446 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AL359314.1-201ENST00000616913 261 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 STMN1P1-201ENST00000617809 440 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 U1.36-201ENST00000620684 176 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 AL355480.1-201ENST00000629041 99 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 MTND5P29-201ENST00000458676 1807 ntBASIC0.68□□□□□ -2.3
CHKB-CPT1BH3BT56 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC104454.1-201ENST00000421341 1401 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 RNA5SP479-201ENST00000364858 117 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-76P-201ENST00000384060 104 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-140P-201ENST00000384566 108 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL139098.1-201ENST00000407291 389 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 OR51A5P-201ENST00000415429 942 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL691517.1-201ENST00000440833 1235 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 SSXP1-201ENST00000453640 473 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC112492.4-201ENST00000456549 352 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 FCF1P6-201ENST00000456841 595 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC096576.1-201ENST00000489014 359 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC114781.4-201ENST00000513707 639 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA48.11-201ENST00000517015 89 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AP002770.2-201ENST00000543613 532 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 RPAP2P1-201ENST00000603626 1168 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC012468.1-201ENST00000604888 430 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC006133.1-201ENST00000617106 264 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL136981.2-201ENST00000617319 734 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL391597.1-201ENST00000618707 694 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AL445493.3-201ENST00000619568 477 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 AC068831.8-201ENST00000620171 435 ntBASIC0.67□□□□□ -2.3
CHKB-CPT1BH3BT56 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA5B-201ENST00000363786 132 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA25.8-201ENST00000364831 128 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNA5SP88-201ENST00000365560 109 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU6-152P-201ENST00000384037 107 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 MIR561-201ENST00000385216 97 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 SNORA40.18-201ENST00000391200 128 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNU2-2P-201ENST00000410396 191 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 BTF3P8-201ENST00000414577 526 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AL358453.1-201ENST00000422522 250 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 DPH3P2-201ENST00000422618 250 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC018630.2-202ENST00000422992 927 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RNF19BPX-201ENST00000426224 625 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RPL7P54-201ENST00000438336 674 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AL161788.1-201ENST00000441805 169 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC017099.1-201ENST00000448261 1028 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AMD1P1-201ENST00000457220 922 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RPS15AP17-201ENST00000470598 390 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RPS3AP14-201ENST00000483907 780 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 RPS27AP10-201ENST00000496103 208 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC011352.3-201ENST00000505162 593 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 ZNF705CP-201ENST00000530515 889 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC009268.1-201ENST00000561352 1203 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC093510.2-201ENST00000562820 896 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC023813.2-201ENST00000564321 469 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC068338.1-201ENST00000565567 176 ntBASIC0.66□□□□□ -2.3
CHKB-CPT1BH3BT56 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms