Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC119751.7-201ENST00000600494 245 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 AC073544.2-201ENST00000601155 540 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 DUXAP4-201ENST00000603046 613 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 AC007363.1-201ENST00000604736 620 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 FTX_3.1-201ENST00000610451 147 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 AC131902.3-201ENST00000611767 581 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 AP001506.1-201ENST00000615444 211 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.82□□□□□ -1.96
NPIPA3F8WFD2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 Y_RNA.201-201ENST00000364052 96 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNU6-7-201ENST00000364784 107 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNU6-8-201ENST00000365467 107 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 SMIM11P1-201ENST00000369586 178 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 SNORA44-201ENST00000384584 132 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNU6-14P-201ENST00000384630 106 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 OR2B8P-201ENST00000432841 938 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 MTATP6P26-201ENST00000445926 662 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 GAPDHP17-201ENST00000449858 1001 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 SNORD42A-201ENST00000459584 64 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 SNORA31.3-201ENST00000516029 96 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNU7-51P-201ENST00000516560 62 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 RNU6-1092P-201ENST00000516955 87 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC090136.1-201ENST00000520009 240 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 HMGB1P41-201ENST00000520234 440 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 H3F3AP1-201ENST00000559984 334 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 MIR3682-201ENST00000581338 84 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AL161798.1-201ENST00000604630 131 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC004805.2-201ENST00000605382 482 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AP003122.6-201ENST00000623831 495 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 TEX21P-201ENST00000447107 1476 ntBASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPIPA3F8WFD2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 MTND5P7-201ENST00000413558 1798 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 RNU6-799P-201ENST00000363567 107 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 RNY1P12-201ENST00000364251 105 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 SNORA20.2-201ENST00000383922 131 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 SNORD116-1-201ENST00000384335 95 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 RNU6-39P-201ENST00000384344 107 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 RPS3AP36-201ENST00000398190 775 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 NDUFB4P5-201ENST00000415445 361 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 ELOCP14-201ENST00000428070 331 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 MTCO2P16-201ENST00000436962 677 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 ELOCP7-201ENST00000439968 331 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC025750.2-201ENST00000442609 450 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 USP9YP29-201ENST00000445112 563 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 MTCO2P29-201ENST00000465212 189 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 SCARNA20.6-201ENST00000517251 106 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 RPS3AP4-201ENST00000555161 764 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC010653.1-201ENST00000571108 881 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 AC040904.1-201ENST00000590850 223 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPIPA3F8WFD2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 AC022336.2-201ENST00000568966 2538 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 Y_RNA.77-201ENST00000362962 107 ntBASIC2.79□□□□□ -1.96
NPIPA3F8WFD2 RNU6-884P-201ENST00000363889 107 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms