Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP99D6REC4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.38□□□□□ -1.55
CFAP99D6REC4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.38□□□□□ -1.55
CFAP99D6REC4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
CFAP99D6REC4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP99D6REC4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 RNU6-137P-201ENST00000363680 108 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 RNU6-923P-201ENST00000364753 107 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 Y_RNA.570-201ENST00000384750 101 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 OR3A2-201ENST00000408891 1076 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 SRSF1P1-201ENST00000424058 520 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 RPL27AP8-201ENST00000424277 446 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 RPL26P26-201ENST00000480251 434 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC016256.1-201ENST00000547971 354 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 MED28P6-201ENST00000558776 231 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 MIR4782-201ENST00000577987 79 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC008749.1-201ENST00000597650 306 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC024153.1-201ENST00000603103 365 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC000068.2-201ENST00000608816 460 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC005296.1-201ENST00000616145 209 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC109583.2-201ENST00000617367 129 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 IGHVIII-44-202ENST00000636235 289 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 AC112198.2-201ENST00000426589 6996 ntBASIC5.37□□□□□ -1.55
CFAP99D6REC4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP99D6REC4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CFAP99D6REC4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP99D6REC4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNU6-626P-201ENST00000363354 107 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNA5SP234-201ENST00000363916 119 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNA5SP132-201ENST00000364725 118 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 Y_RNA.418-201ENST00000384029 102 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 Y_RNA.441-201ENST00000384123 112 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 U3.37-201ENST00000408528 213 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 U3.39-201ENST00000408569 239 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNA5SP487-201ENST00000410186 122 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RN7SKP206-201ENST00000410823 293 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNU6-1135P-201ENST00000411083 103 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNU6-1245P-201ENST00000411130 106 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 CHEK2P5-201ENST00000423877 246 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 RPS5P7-201ENST00000456664 608 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 KC877373.1-201ENST00000479066 408 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RN7SL547P-201ENST00000490793 290 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 BX510359.5-201ENST00000515651 304 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RNA5SP362-201ENST00000516048 118 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AP004607.1-201ENST00000524456 203 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 HMGB1P40-201ENST00000525121 540 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 RN7SL356P-201ENST00000582228 248 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 MIR6862-1-201ENST00000613016 70 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 MIR6862-2-201ENST00000614755 70 ntBASIC5.36□□□□□ -1.55
CFAP99D6REC4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP99D6REC4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CFAP99D6REC4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP99D6REC4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP99D6REC4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP99D6REC4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.35□□□□□ -1.55
CFAP99D6REC4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.35□□□□□ -1.55
CFAP99D6REC4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP99D6REC4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP99D6REC4 MAPK10-304ENST00000641341 3984 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 PCAT14-202ENST00000627127 3935 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 RNA5SP361-201ENST00000362686 118 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 RNU6-142P-201ENST00000384019 107 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 AC009804.1-201ENST00000400949 179 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 POLR2KP2-201ENST00000438155 177 ntBASIC5.35□□□□□ -1.55
CFAP99D6REC4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms