Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU1-72P-201ENST00000362976 153 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 SNORA18.2-201ENST00000383865 132 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 RNU6-339P-201ENST00000384310 107 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 VTA1P1-201ENST00000414044 866 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC234781.2-201ENST00000426370 994 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 TOMM22P2-201ENST00000430735 237 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 RNU7-23P-201ENST00000459465 62 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC008379.1-201ENST00000463655 464 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC021382.1-201ENST00000483523 359 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC005840.1-201ENST00000498412 377 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC104108.1-201ENST00000509930 412 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 TRMT112P2-201ENST00000512910 132 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 RNU6-113P-201ENST00000516653 101 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 HMGB1P14-201ENST00000557424 591 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 ZNF92P3-201ENST00000596594 954 ntBASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.71□□□□□ -2.3
CPSF4LA6NMK7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC010329.5-201ENST00000623497 2174 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 MTND4P31-201ENST00000425607 1343 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 RNU6-939P-201ENST00000384634 107 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 RNU11-5P-201ENST00000391216 129 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 Z73417.1-201ENST00000447373 778 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 UBE2V2P4-201ENST00000447495 259 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC008494.2-201ENST00000514544 370 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 RRN3P3-201ENST00000549207 578 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AL731537.2-201ENST00000561565 951 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC068135.2-201ENST00000569293 1028 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC103810.8-201ENST00000607347 118 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 AC097468.3-201ENST00000607956 456 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CPSF4LA6NMK7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 RNU6-1074P-201ENST00000383995 104 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 SNORD26-201ENST00000384147 75 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 SNORA8-201ENST00000384574 139 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 MIR222-201ENST00000384992 110 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 PRRC2CP1-201ENST00000404428 159 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 CYCSP33-201ENST00000414485 327 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AL096803.2-201ENST00000450032 677 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 TOMM22P6-201ENST00000465035 409 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 FAM206BP-201ENST00000510179 541 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC108729.3-201ENST00000513484 108 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 MIR4498-201ENST00000577599 66 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC011260.1-201ENST00000578420 472 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 DPRXP5-201ENST00000604662 539 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AC073111.2-201ENST00000605657 1075 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 U6.48-201ENST00000618523 106 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AP003476.1-201ENST00000623984 516 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AP003400.5-201ENST00000624827 617 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 AP003399.1-201ENST00000637534 361 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 LINC02211-204ENST00000642024 1070 ntBASIC0.69□□□□□ -2.3
CPSF4LA6NMK7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 TPTE2P4-201ENST00000258589 1605 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 RNU4-23P-201ENST00000362839 140 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 RNU6-338P-201ENST00000383888 105 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 MTATP6P31-201ENST00000406985 692 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 RNU6-712P-201ENST00000410558 100 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 EDDM3CP-201ENST00000415977 425 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC092573.2-201ENST00000434546 243 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 PTENP1-201ENST00000447117 1215 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC139453.3-201ENST00000493276 369 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 KATNBL1P4-201ENST00000503545 918 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC093752.1-206ENST00000511823 336 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC004923.2-201ENST00000529649 369 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 MIR3198-2-201ENST00000577868 80 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 MIR4713-201ENST00000582691 75 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 BNIP3P25-201ENST00000596023 559 ntBASIC0.68□□□□□ -2.3
CPSF4LA6NMK7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms