Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SNORD21-201ENST00000383953 95 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-348P-201ENST00000384386 107 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MIR325-201ENST00000385260 98 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC008850.1-201ENST00000427546 362 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 OR4K11P-201ENST00000431829 904 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 COX6CP2-201ENST00000444980 225 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MTCO2P7-201ENST00000446518 666 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MTND1P9-201ENST00000453775 944 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-714P-201ENST00000516963 103 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-56P-201ENST00000516986 93 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-840P-201ENST00000517275 65 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 PCMTD1P2-201ENST00000565017 355 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC012213.3-201ENST00000577199 777 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 MTCO3P13-201ENST00000577757 781 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC008739.2-201ENST00000597006 317 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC013553.2-201ENST00000604244 589 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 RNU6-88P-201ENST00000606801 100 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC006378.2-201ENST00000623178 2476 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM49BA6NDI0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 OR5H15-201ENST00000383696 930 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 SNORA36C-201ENST00000384289 132 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.559-201ENST00000384686 107 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RNY3P10-201ENST00000384764 102 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RPS3AP36-201ENST00000398190 775 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RPS27AP14-201ENST00000422868 454 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC107083.1-201ENST00000439643 279 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RPL7P36-201ENST00000444633 681 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 BMI1P1-201ENST00000445879 941 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 Z96811.1-201ENST00000445880 108 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RNU6-956P-201ENST00000458868 103 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 MTND4P2-201ENST00000507767 1203 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC079140.3-201ENST00000511111 550 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 RNU6-928P-201ENST00000516876 104 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 CKS1BP7-201ENST00000522230 235 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC010653.1-201ENST00000571108 881 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 MIR3913-1-201ENST00000577744 102 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC091965.4-201ENST00000607691 587 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 BX664608.1-201ENST00000610519 487 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC092140.2-201ENST00000618027 521 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC093591.3-201ENST00000634516 308 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC022336.2-201ENST00000568966 2538 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 CCT4P2-201ENST00000233836 1548 ntBASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM49BA6NDI0 AC007785.2-201ENST00000598627 1916 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.41-201ENST00000362646 102 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.194-201ENST00000363985 102 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 RNU6-1207P-201ENST00000384343 107 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 RNU6-195P-201ENST00000411352 109 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 AC078974.1-201ENST00000411597 223 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 Z85995.1-201ENST00000415547 335 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 USP9YP13-201ENST00000417797 480 ntBASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM49BA6NDI0 USP9YP20-201ENST00000419224 558 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms