Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AL160314.1-201ENST00000490836 438 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC008549.1-201ENST00000512900 643 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC107953.1-201ENST00000522216 297 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC090615.1-201ENST00000577519 154 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 MIR5089-201ENST00000580047 84 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC010928.2-201ENST00000588017 287 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC005261.5-201ENST00000596280 355 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 RPP40P2-201ENST00000603596 712 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC002550.2-201ENST00000621246 394 ntBASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRAV4A0A0B4J268 AC005539.1-201ENST00000443768 1479 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 SUGT1P1-201ENST00000379514 476 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 RPL17P50-201ENST00000396131 546 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 RNA5SP450-201ENST00000411206 102 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AL035407.1-201ENST00000429211 571 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 SNRPEP9-201ENST00000436794 238 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC093155.1-201ENST00000440164 826 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 TPT1P14-201ENST00000448018 505 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 PPP1R2P5-201ENST00000457256 603 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 CKS1BP2-201ENST00000497342 240 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC093281.2-201ENST00000510153 597 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 RN7SL622P-201ENST00000585292 275 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AL031274.2-201ENST00000599419 203 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AL357094.1-201ENST00000603845 844 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 MIR5739-201ENST00000619803 80 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC087821.2-201ENST00000637086 450 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 AC104454.1-201ENST00000421341 1401 ntBASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TRAV4A0A0B4J268 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 RNU6-253P-201ENST00000384730 105 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 SNRPEP2-201ENST00000397592 279 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC019129.1-201ENST00000403786 261 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 CCNG1P1-201ENST00000406783 885 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 RPS20P15-201ENST00000412792 311 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 TAF13P2-201ENST00000416876 286 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC244636.1-201ENST00000421152 228 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 PGBD4P6-201ENST00000421501 610 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AL445685.2-201ENST00000422551 342 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 MTND6P13-201ENST00000443510 523 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 MTCYBP11-201ENST00000447254 1109 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 RPL22P13-201ENST00000493291 347 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC106872.3-201ENST00000495104 446 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 ANXA2P1-201ENST00000505539 926 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 HMGN1P28-201ENST00000521340 364 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC007375.1-201ENST00000554513 578 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AL138478.1-201ENST00000612252 832 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC009233.1-201ENST00000616477 371 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC007490.1-201ENST00000624321 703 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 OR1S1-201ENST00000624470 978 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 AC110994.2-201ENST00000635481 492 ntBASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV4A0A0B4J268 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 MIR506-201ENST00000384998 124 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 SNORA40.19-201ENST00000390846 128 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 MTCYBP45-201ENST00000435243 565 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 IFNA20P-201ENST00000436840 528 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 RPL39P6-201ENST00000448289 150 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 CYP2C59P-201ENST00000457790 269 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 RPL30P9-201ENST00000465586 330 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 RPS15AP17-201ENST00000470598 390 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 MTAPP1-201ENST00000489154 819 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 RPL38P4-201ENST00000502376 214 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AC022861.1-201ENST00000522981 663 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 DEFB122-202ENST00000569013 197 ntBASIC1.35□□□□□ -2.19
TRAV4A0A0B4J268 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms