Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 TPMTP3-201ENST00000411928 735 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AL161449.1-201ENST00000414531 1199 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 C1DP1-201ENST00000426049 402 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 HMGB1P9-201ENST00000429856 646 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MED14P1-201ENST00000430517 648 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 UBE2D3P1-201ENST00000436669 444 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MTND4P6-201ENST00000438297 472 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 USP9YP22-201ENST00000438971 294 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MTCYBP42-201ENST00000444653 1130 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 HIGD1AP2-201ENST00000446367 280 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AL513124.1-201ENST00000450410 614 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 RPL30P9-201ENST00000465586 330 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 SNRPGP18-201ENST00000553000 214 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC009063.1-201ENST00000563342 702 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 MIR3199-1-201ENST00000582434 88 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AC024257.5-201ENST00000612739 531 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AL162373.1-201ENST00000620433 407 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AL138713.1-201ENST00000624026 2130 ntBASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.97□□□□□ -2.09
USH1CQ9Y6N9 AP005901.5-201ENST00000545779 1796 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 FAM133CP-201ENST00000332869 704 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 RNU6-1083P-201ENST00000384022 107 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 MIR218-1-201ENST00000384999 110 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 SNORA11.4-201ENST00000408823 129 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 RN7SKP192-201ENST00000411291 327 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AL109913.1-201ENST00000421173 514 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 BX322784.1-201ENST00000455793 1077 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC093801.2-201ENST00000503966 1050 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 RNU6-583P-201ENST00000516012 92 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 FAM92A1P1-201ENST00000528023 890 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC090897.2-201ENST00000581715 130 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC104984.5-201ENST00000586878 94 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 BBIP1P1-201ENST00000602999 279 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AL450336.1-201ENST00000605180 586 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
USH1CQ9Y6N9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNU6-97P-201ENST00000363387 104 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNU6-343P-201ENST00000364709 104 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 MIR1261-201ENST00000408659 82 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNA5SP425-201ENST00000410336 112 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 CYCSP48-201ENST00000417124 323 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 EIF4EP4-201ENST00000424916 578 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 GTF2IP7-202ENST00000436677 309 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNU7-136P-201ENST00000458819 69 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC072039.1-201ENST00000477611 581 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 ANXA2P1-201ENST00000505539 926 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 MTCYBP16-201ENST00000509187 1129 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC008549.1-201ENST00000512900 643 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNU6-1225P-201ENST00000516336 65 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RN7SKP31-201ENST00000516354 278 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 RNU2-44P-201ENST00000516795 194 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC010186.2-204ENST00000537668 439 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC087897.1-201ENST00000550134 156 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC010133.1-201ENST00000615809 842 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AL357080.1-201ENST00000617394 239 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC010378.1-201ENST00000619270 362 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC073592.7-201ENST00000623659 507 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 AC010889.1-201ENST00000566193 2666 ntBASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USH1CQ9Y6N9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 RNU6-952P-201ENST00000391164 108 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms