Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 GVINP1-202ENST00000531871 7271 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 SNORA21-201ENST00000362423 132 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 Y_RNA.287-201ENST00000364853 94 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP156-201ENST00000410250 110 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC015977.1-201ENST00000418887 292 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AL359073.1-201ENST00000448036 403 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC006026.2-201ENST00000457376 180 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL30P12-201ENST00000474666 353 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AL136038.1-201ENST00000497246 351 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 SNORA43.2-201ENST00000516652 128 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU2-60P-201ENST00000517290 128 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC133485.4-201ENST00000561835 220 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC138907.4-201ENST00000570107 226 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC136624.4-201ENST00000573044 370 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU4ATAC-201ENST00000580972 127 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC020916.2-201ENST00000591242 360 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC006380.1-201ENST00000603598 186 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AL356157.2-201ENST00000605122 111 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AL445567.2-201ENST00000618935 498 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 AC010329.5-201ENST00000623497 2174 ntBASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHGA4Q9Y5G9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU1-134P-201ENST00000362935 165 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 Y_RNA.179-201ENST00000363844 90 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 SNORD32A-201ENST00000364805 84 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 Y_RNA.584-201ENST00000391090 114 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RN7SKP286-201ENST00000410894 299 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 BX510359.3-201ENST00000422168 306 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 DDX39BP1-205ENST00000422507 192 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RPL23AP95-201ENST00000426806 265 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RPS20P22-201ENST00000473700 357 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RNA5SP290-201ENST00000517133 127 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AC107016.1-201ENST00000550463 337 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AC007225.2-201ENST00000562529 256 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AC099669.2-201ENST00000616549 437 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 AP002799.1-201ENST00000623552 423 ntBASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHGA4Q9Y5G9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-324P-201ENST00000363957 106 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-969P-201ENST00000383900 105 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-1275P-201ENST00000391087 107 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 ELOCP21-201ENST00000412558 336 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RPS26P39-201ENST00000469206 341 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RNU6-436P-201ENST00000516171 114 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 SCARNA18.1-201ENST00000516330 83 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 MIR5571-201ENST00000577998 113 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 MIR3674-201ENST00000636576 68 ntBASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHGA4Q9Y5G9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA4Q9Y5G9 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms