Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-552P-201ENST00000362869 119 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-511P-201ENST00000363496 107 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 SNORD46.1-201ENST00000364139 104 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.373-201ENST00000365600 103 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.387-201ENST00000383918 102 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-831P-201ENST00000384548 107 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-328P-201ENST00000390887 106 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-903P-201ENST00000391270 109 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RPS29P4-201ENST00000414733 161 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 CRYBB2P1-203ENST00000415709 538 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC091286.1-201ENST00000431233 461 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNU7-170P-201ENST00000459303 61 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RPS15AP36-201ENST00000492022 382 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC017037.2-201ENST00000513850 890 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP503-201ENST00000517047 117 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AL133153.1-201ENST00000557756 303 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 MIR4775-201ENST00000581168 75 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 MIR5187-201ENST00000583479 76 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AL133215.3-201ENST00000609801 448 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AL136313.1-201ENST00000624804 202 ntBASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.4□□□□□ -1.71
CTDP1Q9Y5B0 AC091152.2-201ENST00000591628 2569 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-38P-201ENST00000384085 107 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 SNORD51-201ENST00000384320 80 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 MIR199A2-201ENST00000385289 110 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RNU2-29P-201ENST00000410423 189 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AL159169.1-201ENST00000421119 127 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 HSPE1P1-201ENST00000421494 318 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 NIPA2P5-201ENST00000452282 464 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 PRSS3P4-201ENST00000453323 162 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-333P-201ENST00000459117 107 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC025554.1-201ENST00000505641 188 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC092436.1-201ENST00000506450 503 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC091885.1-201ENST00000506658 268 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC104619.4-201ENST00000510773 249 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 Y_RNA.665-201ENST00000516177 98 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RPL7P20-201ENST00000520308 745 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AP005597.4-201ENST00000526762 229 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AP005435.4-201ENST00000529514 284 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC109635.4-202ENST00000531666 412 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AL162730.1-201ENST00000605734 292 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 U6.114-201ENST00000636407 96 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTDP1Q9Y5B0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RNU6-1029P-201ENST00000384109 107 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MIR23A-201ENST00000385245 73 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 MT-TC-201ENST00000387405 66 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AL136372.1-201ENST00000403060 228 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RNA5SP56-201ENST00000410277 118 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 OR6C66P-201ENST00000414917 930 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC068533.1-201ENST00000418542 415 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 HSPD1P21-201ENST00000436541 245 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RPS17P13-201ENST00000448974 407 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RPS24P6-201ENST00000452670 400 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 HMGN2P16-201ENST00000456802 261 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 ST13P14-201ENST00000474095 734 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 RPS26P15-201ENST00000488067 348 ntBASIC4.38□□□□□ -1.71
CTDP1Q9Y5B0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms