Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RNA5SP165-201ENST00000517142 115 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 HIF1AP1-201ENST00000553642 175 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC090877.1-201ENST00000561418 344 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AL606490.9-201ENST00000603331 271 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC002553.4-201ENST00000616896 331 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC079684.1-201ENST00000621405 437 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC039056.2-201ENST00000622261 511 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.12□□□□□ -1.91
LSM4Q9Y4Z0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 MIR423-201ENST00000362201 94 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 SNORA71.3-201ENST00000362582 128 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RNY3P3-201ENST00000363816 102 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-371P-201ENST00000364283 108 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RNU2-68P-201ENST00000410878 191 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RHEBP3-201ENST00000411920 351 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 SNRPEP10-201ENST00000420249 274 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC018644.1-201ENST00000429934 551 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 TRBV1-201ENST00000476502 284 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC012181.1-201ENST00000479895 423 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 FAM92A1P2-202ENST00000504766 877 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 LRRC34P2-201ENST00000514850 553 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 SNORD60.2-201ENST00000516883 86 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AP003122.3-201ENST00000526316 255 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC084851.1-201ENST00000529105 249 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AL137161.1-201ENST00000532231 390 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AL138976.2-201ENST00000563989 694 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 MIR5685-201ENST00000579080 79 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC103710.3-201ENST00000608157 948 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC104458.1-201ENST00000608243 463 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 DISC2.1-201ENST00000612827 205 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 DUSP12P1-201ENST00000612874 516 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 CR392039.5-201ENST00000623201 510 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC007256.1-201ENST00000392253 2765 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AC006504.1-201ENST00000562493 3666 ntBASIC3.11□□□□□ -1.91
LSM4Q9Y4Z0 AL354685.2-201ENST00000448218 1447 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 ZNF285B-201ENST00000561698 1767 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RNU6-534P-201ENST00000364877 106 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 MIR449B-201ENST00000384995 97 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RNA5SP38-201ENST00000410750 119 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 USP9YP6-201ENST00000413550 854 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AL158156.1-201ENST00000422509 473 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 RPL36AP53-201ENST00000432891 316 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 SETP5-201ENST00000437270 562 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 HMGN2P20-201ENST00000437531 273 ntBASIC3.1□□□□□ -1.91
LSM4Q9Y4Z0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms