Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC007685.1-201ENST00000329806 452 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 U3.3-201ENST00000362986 216 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-280P-201ENST00000364145 104 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RNA5SP223-201ENST00000365174 120 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.352-201ENST00000365439 102 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-708P-201ENST00000384217 107 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.458-201ENST00000384240 102 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 PTMAP2-201ENST00000397627 327 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RNA5SP36-201ENST00000410197 133 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-628P-201ENST00000410675 107 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 EI24P1-201ENST00000416584 867 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 SDAD1P3-201ENST00000427380 333 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 U8.21-201ENST00000459536 136 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC092754.1-201ENST00000472975 479 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC091144.1-201ENST00000519573 138 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 PRPF19P1-201ENST00000584766 898 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 AC010900.2-201ENST00000604508 210 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 DDX18P3-201ENST00000404856 2007 ntBASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 SDAD1P2-201ENST00000441308 2028 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.33-201ENST00000362591 102 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.237-201ENST00000364439 102 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 MIR521-1-201ENST00000384902 87 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 SNORD115-46-201ENST00000390982 71 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 MTCYBP2-201ENST00000407745 171 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 RNU2-33P-201ENST00000410344 192 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 SNORD56-201ENST00000413522 71 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 RPS29P10-201ENST00000439197 166 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AC104332.1-201ENST00000440471 797 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 RPS23P5-201ENST00000495419 428 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AC067942.3-201ENST00000512025 362 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 RNU4-71P-201ENST00000516258 113 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AL121603.1-201ENST00000553815 142 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AC073410.2-201ENST00000603240 332 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AC006077.1-201ENST00000604746 343 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 AC004852.3-201ENST00000614131 326 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 uc_338.7-201ENST00000621834 124 ntBASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HCN4Q9Y3Q4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.111-201ENST00000363248 100 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 RNU6-746P-201ENST00000384112 109 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 RNA5SP494-201ENST00000410653 129 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 CKS1BP5-201ENST00000434172 273 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AL139109.1-201ENST00000455491 297 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 HSPE1P6-201ENST00000479457 291 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 RNA5SP471-201ENST00000516971 106 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 Y_RNA.713-201ENST00000517013 96 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC009314.1-201ENST00000603871 304 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 ARF4P1-201ENST00000605447 541 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AC099654.2-201ENST00000433031 1980 ntBASIC5.15□□□□□ -1.59
HCN4Q9Y3Q4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 AL031595.2-201ENST00000624215 19071 ntBASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HCN4Q9Y3Q4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms