Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ACTR3BP3-201ENST00000565577 979 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 MIR3146-201ENST00000580367 79 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 MIR3609-201ENST00000582661 80 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC025811.1-201ENST00000604312 472 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 RNU5A-8P-201ENST00000364102 114 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 RNU1-39P-201ENST00000383897 165 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 SNORD115.1-201ENST00000391109 76 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 RNU1-101P-201ENST00000391171 127 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 RNA5SP38-201ENST00000410750 119 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 CBWD4P-201ENST00000445695 655 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC010631.1-201ENST00000474150 156 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC096725.1-201ENST00000514266 313 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC007834.2-201ENST00000536310 343 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AL359999.1-201ENST00000604513 294 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 SNHG22-203ENST00000617833 660 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 Z99129.2-201ENST00000619967 314 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 AC010733.2-201ENST00000589496 5702 ntBASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHROOM4Q9ULL8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC093908.1-201ENST00000623125 8092 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 RNA5SP289-201ENST00000362332 137 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 MIR518C-201ENST00000384822 101 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 5S_rRNA.2-201ENST00000391293 112 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AL590365.1-201ENST00000450788 243 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AP004217.1-201ENST00000480579 346 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 KCTD9P5-201ENST00000504141 1170 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 OR5BM1P-201ENST00000512021 366 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 RNU6-1231P-201ENST00000517185 103 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC007115.1-201ENST00000546853 234 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 TRAV37-201ENST00000553906 342 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AL356432.3-201ENST00000568952 465 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 ZNF861P-201ENST00000588126 639 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC013553.2-201ENST00000604244 589 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 HSPE1P7-201ENST00000604681 321 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AC105129.3-201ENST00000605455 485 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 AL020991.1-201ENST00000612314 373 ntBASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SHROOM4Q9ULL8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 RNU5F-6P-201ENST00000362979 116 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 RNU6-533P-201ENST00000384144 107 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AL591806.2-201ENST00000433122 173 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 RPS29P6-201ENST00000438196 145 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AC092798.1-201ENST00000458542 409 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AL049830.2-201ENST00000480072 201 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 RN7SKP43-201ENST00000516173 320 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 HMGB1P14-201ENST00000557424 591 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AC083760.1-201ENST00000589621 670 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AC005046.1-201ENST00000608515 625 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AC004696.1-201ENST00000614345 607 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 MTND4P4-201ENST00000439033 1366 ntBASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.1□□□□□ -1.59
SHROOM4Q9ULL8 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 RPL21P3-201ENST00000395517 478 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 FCF1P10-201ENST00000407590 479 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 RPL17P12-201ENST00000413391 526 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 MTATP6P17-201ENST00000431030 672 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AL139415.2-201ENST00000431968 163 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AL513043.1-201ENST00000439124 535 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AC005094.1-201ENST00000440420 368 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AC146507.2-201ENST00000460608 476 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AP000797.1-201ENST00000478870 387 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 OSBPL9P5-201ENST00000542581 171 ntBASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.09□□□□□ -1.59
SHROOM4Q9ULL8 AC002545.1-201ENST00000592511 181 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms