Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 Y_RNA.315-201ENST00000365117 102 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 SNORD116-29-201ENST00000384516 83 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 RNU6-882P-201ENST00000391025 103 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 RNU4-26P-201ENST00000410270 107 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 RNU2-43P-201ENST00000410306 190 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 RNU4-14P-201ENST00000410858 122 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 HSPE1P12-201ENST00000412576 301 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AL691449.1-201ENST00000426570 421 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 GOT2P5-201ENST00000433995 546 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AL118558.2-201ENST00000556294 238 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 MIR3671-201ENST00000580455 88 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 MIR4775-201ENST00000581168 75 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AL022099.1-201ENST00000604551 712 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 AL354798.1-201ENST00000622505 329 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 MTND4LP32-201ENST00000636111 270 ntBASIC4.42□□□□□ -1.7
PUF60Q9UHX1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PUF60Q9UHX1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 HSPE1P11-201ENST00000339579 310 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 RNU6-173P-201ENST00000364215 104 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 U3.11-201ENST00000364476 212 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 Y_RNA.301-201ENST00000364990 103 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 SNORA4.3-201ENST00000365564 137 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 MIR559-201ENST00000385188 96 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC004866.2-201ENST00000438285 481 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 GTF2IP13-201ENST00000438487 386 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 HMGB3P11-201ENST00000440127 604 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL118520.1-201ENST00000450770 291 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 Y_RNA.639-201ENST00000458981 102 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC126389.1-201ENST00000477436 290 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 HMGB1P41-201ENST00000520234 440 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 SNRPGP16-201ENST00000533275 226 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 COX6CP3-201ENST00000580869 223 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 MIR4424-201ENST00000585257 86 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 SNRPGP17-201ENST00000603780 214 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 CTHRC1P1-201ENST00000605383 469 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC130324.3-201ENST00000614165 542 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AL355810.1-201ENST00000614629 552 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 MIR6130-201ENST00000619419 109 ntBASIC4.41□□□□□ -1.7
PUF60Q9UHX1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.41□□□□□ -1.7
PUF60Q9UHX1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
PUF60Q9UHX1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PUF60Q9UHX1 TAB3P1-202ENST00000452645 1634 ntBASIC4.4□□□□□ -1.7
PUF60Q9UHX1 Y_RNA.100-201ENST00000363141 102 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RNU6-511P-201ENST00000363496 107 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RNU6-1078P-201ENST00000364522 103 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 SNORA11.1-201ENST00000408133 129 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RNU2-62P-201ENST00000410868 191 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 SSXP9-201ENST00000417503 292 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 MED13P1-201ENST00000428342 171 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AL445584.1-201ENST00000431451 330 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 SETP5-201ENST00000437270 562 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 PRPS1P1-201ENST00000445305 876 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RPS17P13-201ENST00000448974 407 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RNU7-182P-201ENST00000459009 62 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AC027575.1-201ENST00000481064 460 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RPL29P14-201ENST00000495837 428 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 AC005741.1-201ENST00000511094 432 ntBASIC4.4□□□□□ -1.71
PUF60Q9UHX1 RNU6-559P-201ENST00000516151 98 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms