Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RPS23P10-201ENST00000416185 486 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 ATG3P1-201ENST00000419507 911 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC018865.2-201ENST00000423631 129 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 SNAP23P1-201ENST00000433229 246 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RPL21P23-201ENST00000446654 460 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC234775.1-201ENST00000454247 670 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 HMGB1P25-201ENST00000468402 607 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC097473.1-201ENST00000508142 408 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 SNORA70.24-201ENST00000517233 118 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC090115.3-201ENST00000553218 849 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC010653.1-201ENST00000571108 881 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL670379.6-201ENST00000603753 252 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL031176.1-201ENST00000604554 466 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL670379.1-201ENST00000604752 252 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL670379.5-201ENST00000605253 252 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL670379.8-201ENST00000605353 252 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AL670379.7-201ENST00000605823 252 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 MIR6128-201ENST00000615528 109 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 AC083843.3-201ENST00000623679 2186 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 MTND5P30-201ENST00000452896 1731 ntBASIC4.58□□□□□ -1.68
PDLIM7Q9NR12 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.193-201ENST00000363979 102 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 MIR34B-201ENST00000385076 84 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 SNORA16.2-201ENST00000390991 127 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RN7SKP156-201ENST00000410308 342 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RNU4-65P-201ENST00000410473 140 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 SNORA57.3-201ENST00000411095 141 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 HSPE1P12-201ENST00000412576 301 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC092447.6-201ENST00000414578 210 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AL358472.1-201ENST00000431295 329 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 GAPDHP27-201ENST00000447427 1020 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 FABP5P13-201ENST00000452144 328 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC104472.2-201ENST00000469035 601 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RNU6-123P-201ENST00000516163 102 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RNU6-764P-201ENST00000516396 105 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1016P-201ENST00000516689 94 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 MIR5692C1-201ENST00000585309 91 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC073539.2-201ENST00000597113 165 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AL138889.2-201ENST00000603883 242 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC009570.1-201ENST00000609599 745 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 U2.17-201ENST00000611454 95 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 TUG1_2.1-201ENST00000614234 87 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC007485.1-201ENST00000616755 206 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AC092608.2-201ENST00000624427 218 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 AP000542.2-201ENST00000623199 6179 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ZNF807-201ENST00000328088 1707 ntBASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM7Q9NR12 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RNU6-593P-201ENST00000364716 112 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RNU6-1318P-201ENST00000365389 103 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AL133412.1-201ENST00000380194 2992 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RNU6-701P-201ENST00000384059 107 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.527-201ENST00000384573 102 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.557-201ENST00000384680 107 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 CYCSP43-201ENST00000438233 310 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RPL12P25-201ENST00000455592 494 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 HMGB3P30-201ENST00000457863 606 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 AC008481.1-201ENST00000463278 396 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 TRBV1-201ENST00000476502 284 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 SNORA25.10-201ENST00000515926 124 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 Y_RNA.661-201ENST00000516003 99 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RNU1-95P-201ENST00000516357 160 ntBASIC4.56□□□□□ -1.68
PDLIM7Q9NR12 RNU1-128P-201ENST00000516704 160 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms