Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 RNU2-10P-201ENST00000516375 211 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 RNU6-840P-201ENST00000517275 65 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AL512360.1-201ENST00000555346 234 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 MIR4801-201ENST00000582704 82 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC024220.1-201ENST00000603675 484 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC008536.2-201ENST00000607284 349 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AL390240.1-201ENST00000612950 384 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 AC009161.2-201ENST00000624626 138 ntBASIC3.29□□□□□ -1.88
PCDH9Q9HC56 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH9Q9HC56 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 Y_RNA.9-201ENST00000362354 101 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RNU6-1085P-201ENST00000363576 107 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RNU6-1090P-201ENST00000364065 94 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 Y_RNA.248-201ENST00000364501 109 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SNORA46-201ENST00000384762 135 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RNVU1-14-201ENST00000384770 164 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MIR34B-201ENST00000385076 84 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 TXNP7-201ENST00000406296 293 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AL354719.1-201ENST00000406535 843 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MTATP6P18-201ENST00000417994 673 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 USP9YP18-201ENST00000425912 695 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RPS15AP9-201ENST00000439856 381 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RPS12P18-201ENST00000442381 270 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MTCO3P45-201ENST00000443036 613 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC016696.1-201ENST00000446949 318 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RN7SL601P-201ENST00000471221 293 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC010631.1-201ENST00000474150 156 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RPL32P34-201ENST00000486380 400 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC019235.1-201ENST00000503847 207 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SLC25A15P5-201ENST00000508033 253 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 RNU7-51P-201ENST00000516560 62 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 OR4R1P-201ENST00000529879 463 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SNRPGP16-201ENST00000533275 226 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AK6P1-201ENST00000540219 478 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MIR2682-201ENST00000580305 110 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC025449.1-201ENST00000603896 529 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 uc_338.25-201ENST00000613756 156 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC004696.1-201ENST00000614345 607 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 AC007014.2-201ENST00000615581 479 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDH9Q9HC56 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
PCDH9Q9HC56 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 CR848007.1-201ENST00000442354 1699 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 TAB3P1-202ENST00000452645 1634 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RNU6-511P-201ENST00000363496 107 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RNU6-188P-201ENST00000364207 107 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDH9Q9HC56 DEFB109C-201ENST00000382575 264 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 DEFB109B-201ENST00000382656 264 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RNU6-641P-201ENST00000384006 107 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 RNU6-76P-201ENST00000384060 104 ntBASIC3.27□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.453-201ENST00000384223 109 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms