Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS16Q9H269 BX679664.1-201ENST00000434429 253 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 RPL26P6-201ENST00000440913 438 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC016691.1-201ENST00000441321 413 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS16Q9H269 AC008481.1-201ENST00000463278 396 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC010401.1-201ENST00000463867 348 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 RPL21P104-201ENST00000464143 478 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC108860.1-201ENST00000484521 383 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 HMGN1P13-201ENST00000505795 138 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS16Q9H269 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS16Q9H269 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 RANP9-201ENST00000519957 271 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC022616.3-201ENST00000523940 148 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS16Q9H269 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS16Q9H269 AC128657.1-201ENST00000549459 145 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC078814.3-201ENST00000553036 491 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 MTCO3P13-201ENST00000577757 781 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 MIR3690-201ENST00000580266 75 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS16Q9H269 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 PART1_1.1-201ENST00000611761 217 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS16Q9H269 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS16Q9H269 SNHG22-203ENST00000617833 660 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC090574.1-201ENST00000623186 233 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AP003355.3-201ENST00000623465 114 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AC009161.2-201ENST00000624626 138 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AL136313.1-201ENST00000624804 202 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 AL513302.2-201ENST00000562313 1842 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS16Q9H269 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS16Q9H269 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS16Q9H269 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VPS16Q9H269 Y_RNA.58-201ENST00000362807 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 Y_RNA.154-201ENST00000363624 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 RNU6-1284P-201ENST00000363701 100 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 Y_RNA.166-201ENST00000363730 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 RNY3P1-201ENST00000365085 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 RNY3-201ENST00000365484 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 Y_RNA.460-201ENST00000384255 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 Y_RNA.490-201ENST00000384413 102 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS16Q9H269 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS16Q9H269 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS16Q9H269 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS16Q9H269 RPS4XP2-201ENST00000458402 793 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 VN1R17P-201ENST00000472048 1090 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 RPS27AP1-201ENST00000475545 471 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS16Q9H269 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS16Q9H269 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS16Q9H269 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS16Q9H269 RNA5SP401-201ENST00000515920 127 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 SNORA40.12-201ENST00000516329 111 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 RNU6-840P-201ENST00000517275 65 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 OR4H12P-201ENST00000556269 907 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS16Q9H269 MED28P6-201ENST00000558776 231 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 MIR3186-201ENST00000577404 85 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS16Q9H269 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 AC092628.2-201ENST00000622492 339 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.82□□□□□ -1.8
VPS16Q9H269 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS16Q9H269 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS16Q9H269 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS16Q9H269 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS16Q9H269 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS16Q9H269 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS16Q9H269 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS16Q9H269 RIOK3P1-201ENST00000418778 1528 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AF127577.6-201ENST00000623352 2191 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 RNU6-1120P-201ENST00000362988 108 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 Y_RNA.157-201ENST00000363638 102 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 RNU6-1227P-201ENST00000383981 107 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 RNU6-692P-201ENST00000384496 107 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC110754.1-201ENST00000399740 601 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AP000907.1-201ENST00000428428 510 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 RPL23AP30-201ENST00000432419 501 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 RPL36AP53-201ENST00000432891 316 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 RNU6-261P-201ENST00000459506 102 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS16Q9H269 GMPSP1-201ENST00000514075 579 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AC090572.1-201ENST00000519251 160 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC105029.1-201ENST00000520250 669 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AP003072.2-201ENST00000527756 676 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS16Q9H269 RPL23AP84-201ENST00000571193 464 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms