Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.53□□□□□ -1.84
CDT1Q9H211 USP9YP8-201ENST00000441913 500 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.53□□□□□ -1.84
CDT1Q9H211 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.53□□□□□ -1.84
CDT1Q9H211 AL121871.1-201ENST00000443413 436 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
CDT1Q9H211 RPS24P6-201ENST00000452670 400 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AC109925.1-201ENST00000478069 331 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.53□□□□□ -1.84
CDT1Q9H211 KLHL2P1-201ENST00000508691 521 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.53□□□□□ -1.84
CDT1Q9H211 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.53□□□□□ -1.84
CDT1Q9H211 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.53□□□□□ -1.84
CDT1Q9H211 RNU6-875P-201ENST00000516488 106 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.53□□□□□ -1.84
CDT1Q9H211 RAB11AP2-201ENST00000545905 639 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 FAM60BP-201ENST00000578364 658 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 MIR5004-201ENST00000579078 107 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 SNORD84-203ENST00000584275 78 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 AC008752.3-201ENST00000588113 712 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 TUG1_2.1-201ENST00000614234 87 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 MIR8057-201ENST00000620957 69 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
CDT1Q9H211 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
CDT1Q9H211 AL354685.2-201ENST00000448218 1447 ntBASIC3.53□□□□□ -1.85
CDT1Q9H211 DDX10P1-201ENST00000448545 1933 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.52□□□□□ -1.85
CDT1Q9H211 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDT1Q9H211 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDT1Q9H211 AC116096.1-201ENST00000566804 2314 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
CDT1Q9H211 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDT1Q9H211 RNA5SP374-201ENST00000362939 125 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 RNU6-1085P-201ENST00000363576 107 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 RNY1P12-201ENST00000364251 105 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDT1Q9H211 AL109755.1-201ENST00000401791 649 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 RNU6-908P-201ENST00000410160 94 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 RNU6-55P-201ENST00000411092 107 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 RNU6-954P-201ENST00000411355 107 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AL159169.1-201ENST00000421119 127 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC137499.1-201ENST00000427602 88 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AL353705.1-201ENST00000433468 480 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC006028.1-201ENST00000438379 402 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 MTCO3P18-201ENST00000440206 761 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC005094.1-201ENST00000440420 368 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AL162389.1-201ENST00000449233 177 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AL049714.1-201ENST00000466686 347 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 MTCYBP18-201ENST00000501056 747 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AC010493.1-201ENST00000513479 292 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC109635.3-201ENST00000529536 185 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDT1Q9H211 AC123904.3-201ENST00000547218 814 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AL157687.1-201ENST00000554853 619 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
CDT1Q9H211 AC037471.2-201ENST00000564941 598 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AL356055.1-201ENST00000602528 446 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 Y_RNA.804-201ENST00000615262 101 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AL603758.1-201ENST00000618654 241 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.52□□□□□ -1.85
CDT1Q9H211 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDT1Q9H211 TAB3P1-202ENST00000452645 1634 ntBASIC3.52□□□□□ -1.85
CDT1Q9H211 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDT1Q9H211 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.51□□□□□ -1.85
CDT1Q9H211 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDT1Q9H211 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.51□□□□□ -1.85
CDT1Q9H211 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC007256.1-201ENST00000392253 2765 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDT1Q9H211 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 AP000567.1-201ENST00000406413 156 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.51□□□□□ -1.85
CDT1Q9H211 PPP1R11P2-201ENST00000423543 382 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.51□□□□□ -1.85
CDT1Q9H211 GTF2IP20-201ENST00000431663 360 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC022364.2-201ENST00000457963 554 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.51□□□□□ -1.85
CDT1Q9H211 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 HMGN1P12-201ENST00000499125 195 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 MLLT10P2-201ENST00000506434 249 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms