Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RN7SKP192-201ENST00000411291 327 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 TOMM20P4-201ENST00000427861 435 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 PSMA6P3-201ENST00000428242 164 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AL590233.1-201ENST00000430017 456 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 ZNF114P1-201ENST00000453500 292 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 BX322784.1-201ENST00000455793 1077 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC114981.1-201ENST00000503897 678 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC026436.1-201ENST00000510537 270 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 HSPA8P13-201ENST00000523715 472 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC012414.6-201ENST00000568241 401 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC105129.3-201ENST00000605455 485 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC097468.3-201ENST00000607956 456 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AC073968.1-201ENST00000618594 637 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 AL445523.1-201ENST00000451184 1362 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC093536.2-201ENST00000565257 1406 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 Y_RNA.18-201ENST00000362461 102 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RNU6-462P-201ENST00000362659 105 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RNU4-21P-201ENST00000362802 126 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 U3.12-201ENST00000364498 214 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORD116-9-201ENST00000384000 95 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORD116-3-201ENST00000384287 95 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORD116-7-201ENST00000384404 95 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 Y_RNA.493-201ENST00000384422 102 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORD116-5-201ENST00000384462 95 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 MIR504-201ENST00000385065 83 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 MT-TH-201ENST00000387441 69 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORA26.8-201ENST00000391306 124 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AL591416.1-201ENST00000404015 867 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RNU4-78P-201ENST00000410940 126 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RPL7P37-201ENST00000425095 738 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 THAP5P1-201ENST00000439089 262 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC109486.1-201ENST00000486833 374 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC105313.1-201ENST00000509121 353 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 OR5BM1P-201ENST00000512021 366 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC093677.1-201ENST00000514414 678 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SNORA31.8-201ENST00000516327 108 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 RNU1-104P-201ENST00000517280 175 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC106038.2-201ENST00000520706 568 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 OR6C7P-201ENST00000547875 934 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 XIAPP1-201ENST00000603162 600 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 BCRP9-201ENST00000605312 388 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC103810.6-201ENST00000606708 136 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 MIR6817-201ENST00000615588 66 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC009090.3-201ENST00000616553 565 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC004009.2-201ENST00000623016 728 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC092608.2-201ENST00000624427 218 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 AC243829.7-201ENST00000633081 225 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 ELL2P3-201ENST00000457883 1602 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 DDX43P2-201ENST00000604753 1354 ntBASIC2.19□□□□□ -2.06
RSPO3Q9BXY4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 NUP58P1-201ENST00000502546 1738 ntBASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 Y_RNA.318-201ENST00000365131 97 ntBASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 AL031679.1-201ENST00000400616 525 ntBASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RSPO3Q9BXY4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms