Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AF235103.2-201ENST00000525753 346 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AP003072.2-201ENST00000527756 676 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKP4Q99569 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP4Q99569 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC060771.1-201ENST00000582031 164 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 UBE2V2P2-201ENST00000587677 504 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC068790.3-201ENST00000602988 553 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP4Q99569 MIR6130-201ENST00000619419 109 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 MIR6075-201ENST00000620782 95 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC012150.2-201ENST00000621300 544 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC079597.1-201ENST00000624306 508 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC009161.2-201ENST00000624626 138 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 FER-210ENST00000628534 558 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC011460.1-201ENST00000636268 1834 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PKP4Q99569 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PKP4Q99569 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PKP4Q99569 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PKP4Q99569 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PKP4Q99569 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKP4Q99569 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKP4Q99569 Y_RNA.160-201ENST00000363677 92 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 MIR449B-201ENST00000384995 97 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 MIR670-201ENST00000390142 98 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 RNU6-1009P-201ENST00000390996 107 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 RPS4XP8-201ENST00000402039 771 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 RNU6-908P-201ENST00000410160 94 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 Z99755.1-201ENST00000414048 380 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 SSXP9-201ENST00000417503 292 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 ELOCP4-201ENST00000420090 333 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 SNRPEP10-201ENST00000420249 274 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 TMEM167AP1-201ENST00000423409 219 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 AC024082.2-201ENST00000434771 238 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 AC098614.3-201ENST00000438957 440 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 MRPS31P2-201ENST00000451581 518 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 MTND1P11-201ENST00000456661 876 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 RNU6-420P-201ENST00000458780 107 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC055855.1-201ENST00000489563 579 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC091951.2-201ENST00000500762 203 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKP4Q99569 AC018710.1-201ENST00000506509 158 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.33□□□□□ -1.88
PKP4Q99569 AL359273.1-201ENST00000510918 627 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 RNU6-875P-201ENST00000516488 106 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 AC022616.3-201ENST00000523940 148 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP4Q99569 MIR3146-201ENST00000580367 79 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 UBE2L4-201ENST00000587688 464 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 BNIP3P22-201ENST00000593399 556 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 U3.45-201ENST00000607547 219 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 AL158801.5-201ENST00000623123 465 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKP4Q99569 PWAR6-201ENST00000552334 4618 ntBASIC3.33□□□□□ -1.88
PKP4Q99569 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.33□□□□□ -1.88
PKP4Q99569 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKP4Q99569 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PKP4Q99569 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PKP4Q99569 AC009902.3-201ENST00000606235 2172 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
PKP4Q99569 RNU6-1120P-201ENST00000362988 108 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RNU6-1097P-201ENST00000363586 107 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RNY4P16-201ENST00000364768 94 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RNU6-169P-201ENST00000365336 107 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RNU6-108P-201ENST00000365558 107 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PKP4Q99569 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.32□□□□□ -1.88
PKP4Q99569 AL356776.1-201ENST00000406574 447 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RNA5SP38-201ENST00000410750 119 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PKP4Q99569 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.32□□□□□ -1.88
PKP4Q99569 RPS15AP12-201ENST00000419498 388 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.32□□□□□ -1.88
PKP4Q99569 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.32□□□□□ -1.88
PKP4Q99569 AC137499.1-201ENST00000427602 88 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 AP000907.1-201ENST00000428428 510 ntBASIC3.32□□□□□ -1.88
PKP4Q99569 RPL21P40-201ENST00000428586 483 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms